Shewanella aestuarii: HBH39_10365
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Entry
HBH39_10365 CDS
T06921
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
saes
Shewanella aestuarii
Pathway
saes03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
saes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HBH39_10365 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saes03400
]
HBH39_10365 (recB)
Enzymes [BR:
saes01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HBH39_10365 (recB)
DNA repair and recombination proteins [BR:
saes03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HBH39_10365 (recB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_11
AAA_25
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QIR14841
UniProt:
A0A6G9QLX5
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All DBs
Position
PN3F2:2313742..2317464
Genome browser
AA seq
1240 aa
AA seq
DB search
MNTPATSNKVQALDPLTLPLTGSSLIEASAGTGKTYTISGLYLRLLLGHGGQTPLTCEQI
LVVTFTNAATEELRDRIRKRIQLAYKCFLGLTVNDPFIETLYAQTVESERPIALKRFDLA
LKSLDEGAIFTIHGFCQRVLSDMAFESSLLFESEFTLDDSEYLHHAVRDFWREVCYPLPM
MMAQQIDKHFVEPEKLAAKVRRLLGASEAQPSTTPKEFVSLSQELITSINRFKLAWTAQQ
EATFELLTNLPLNGSRFGKASDGYPKLAKLFDELTNWVSYGQGLPPQKTLTQLALSDLKL
NKGGVLPTSKEAPLLAQIDDLLAMINDIIPAFLVRAQAGIKQRFIQQKNQRNLMTPDDLL
TSLAAALDANPHTLATAIAKRFPIALIDEFQDTDPLQFKIFNMVYQTPALVTLPDSDISA
NTENDANAATTPYQAAQSSLGLLMIGDPKQAIYAFRGADIFTYISARNQTQKLYNLDTNY
RSSTALVDGVNHVFNQHANPFISDAIPYDVVKTPDSANQKTLQEATPQTAALRIKILKED
PDNGLNKPTARHILASDTAAEIKRLLTEAQRGQCCIKDKPLIAKNIAVLVRDRNEAAIVK
KALSARNIGAVFLSRDSVFATNEASELALILRALANPKDEPRIRAALATSLFGYTAQQID
QFNHNEDARQQVLDEFTHWHELWVRNGIMPALLSLANDRNLVHRLLAKNAVQTPEGETEQ
TDDEEVNLDASGERRLTDFRHLGELLQQKATELDGSSALINWFEQQLIDNQGKDEQQLRL
ESEQNLVQIITIHKSKGLEYPICFIPFVSLARGGTQRPEPLLYHANGKLIWDIQGSDEAY
EQYKKETLAEDLRLLYVALTRPVYACYLYIANQSKLLKAGISSQLYETAIGYLLGIKDKN
CDGELLEKQAKALASIDAISIDEVASVPDSSVFEDNQAHNVQLSAKSTQRKMGLPWRVGS
YSGLVKHLPHEKVSPGADDEDFTQDSALVEDNPNTLALNRFSFERGANAGSFMHLVLELF
DFTQAETELEPALIEAMKQYGFDQQTWLAPLTAWYHDILHTPLIKPDHSQLCLAQLTANQ
TLVEMEFYLPISQLNATKLNALLAQYGYINNFSFDTLKGMLKGFVDLVFEHQGQYFIADY
KSNHLGNQLQHYNHHAMSEAINSHRYNLQYLLYTLALHRYLKLRLPHYQYDVHIGGCFYL
FLRGMSPESLGSGVFFDKPDAALIDQLDSLFSQPVGSEAC
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgaatacacccgctacctcaaataaagtacaggcgcttgatccgttaactctgccactc
accggttcaagcttaattgaagccagcgctggcacaggcaaaacctatacgatttccggt
ttatatttacgcttactgctaggccatggcggacaaacaccgctgacttgtgagcaaatt
ctggtggtaacctttaccaatgcggcaacagaagagttacgagacaggatcagaaaacgg
atccaattagcctataaatgctttttagggctgacggtcaatgatccttttatcgaaacc
ttatatgcacaaaccgttgaaagtgaacggcccatagccttaaagcgttttgacttagca
ctaaaatcccttgatgaaggcgctatttttaccattcatggtttttgtcagcgagtgttg
tctgacatggcttttgaatcatcattattatttgagtcagagttcaccttagatgacagc
gaatacttgcatcatgctgtgcgcgatttttggcgcgaagtctgttacccactacctatg
atgatggcgcagcaaattgataagcattttgttgaacctgaaaaactagccgctaaagta
cggcgcttattaggcgcaagtgaagcgcagccatcaactacgccgaaagagtttgtcagc
ctaagccaagagctcattactagcatcaatcgttttaaattagcttggacggcgcaacaa
gaggccacctttgagttattaactaacttgccacttaacggctcacgctttggtaaagcc
agtgacggctaccctaaattagccaaattatttgatgagttaaccaactgggttagttat
ggccaaggcttacccccgcaaaaaaccttaacgcaattagccttatccgatttaaaactg
aataaaggcggagtactcccgacgtcgaaagaggccccgctgctagcgcaaatcgacgat
ttattagcgatgataaacgatatcattccagcgtttttagtacgcgcgcaagctgggatc
aaacagcgctttatccagcaaaaaaatcagcgtaatttaatgacgcctgatgatttgctc
accagtttagccgccgctttggatgctaacccgcacactttagcgaccgctatcgccaag
cgatttcccattgcattaattgatgagtttcaagatacagacccattgcaatttaaaatt
tttaatatggtttatcaaacacctgcgttagtaacactgcctgactcggatataagcgcg
aatactgaaaatgatgcaaatgctgctaccacaccttatcaagctgcacagtcaagctta
ggcttattgatgattggcgacccaaaacaagcgatttatgcgtttcgaggtgccgatatt
tttacctatattagcgctcgtaatcaaacacaaaagctctacaacttagacacgaactac
cgttcatctaccgcattggttgatggagtgaatcatgtatttaatcagcatgcaaaccca
tttattagcgatgctattccatatgatgtggtaaaaacgcctgattcagccaatcaaaaa
acactgcaagaagcaacgccacaaacagcggcattgagaataaaaattcttaaagaggac
ccagataacggcttaaataagcccactgcccgacacattttagccagtgacaccgcagcc
gaaattaaacgcttattaaccgaagcacagcgtggtcaatgttgtataaaagataagccg
ctaattgccaaaaacattgccgtattagttcgtgatagaaacgaagccgcaatcgtaaaa
aaagcactcagcgcccgtaacattggcgcagtgtttttaagccgagacagtgtatttgcc
accaatgaagccagcgagttagccctcatattacgggccctcgccaatcctaaggatgaa
cctcgtattcgcgcagcactggcaacgtcactttttggttatacggcacagcaaattgat
caatttaatcataatgaagatgcacgccaacaggtgctagatgagtttactcactggcac
gagttatgggttagaaatggcattatgcctgccctgctgagccttgctaacgatcgtaat
cttgtacatagattattggctaaaaacgccgtacaaacaccagaaggcgaaacagagcaa
actgacgatgaagaggtcaatcttgatgcatcgggcgaacgccgattaaccgattttcgc
cacttaggtgagctactacaacaaaaagccactgagcttgacggcagcagcgcactgata
aactggtttgagcaacaattaattgataaccaaggtaaagacgagcagcaacttcgtttg
gaaagcgaacaaaacttagtgcaaatcattactatccataaatcaaaaggactggaatat
cctatttgttttataccgtttgtgagtctagcccgtggcggaactcaacggccagaaccg
ctactttatcacgctaatggcaaactgatttgggatattcaaggctctgatgaagcctat
gaacaatacaaaaaagagactctggctgaagatttacgcttactttatgtcgcgttaacc
cgccctgtttatgcctgttatctctatattgccaaccaatctaagctgcttaaagcaggg
atcagctcacagttatatgaaaccgctatcggctatttattgggtattaaagataaaaac
tgtgacggcgagttacttgaaaagcaagccaaggcactagcgagtattgatgccattagt
atcgatgaggttgcaagcgtgcctgacagcagcgtatttgaagataaccaagcacacaat
gttcaacttagtgccaaatctacccaacgaaaaatgggtttaccttggcgagtgggcagt
tattccggtttagtcaaacaccttccccatgaaaaagtcagccccggagcggatgatgaa
gattttactcaagatagcgcgcttgttgaagacaacccaaacacactggcgttaaatcgt
ttcagcttcgaacgtggcgcgaatgcgggtagttttatgcacttggtattagagctattt
gattttacgcaagctgaaaccgaattggagcccgcattaattgaggccatgaagcaatat
ggttttgatcaacaaacctggttagctccgctaacggcttggtatcacgatatcctccac
acgcccttgattaaacccgatcatagccagctgtgtttagcgcaattaacggccaatcaa
accttggttgagatggagttttacttacctatcagccagcttaatgcgaccaaactcaat
gccttactcgcgcaatatggatacattaacaacttcagttttgacaccttaaaaggcatg
ttgaaaggttttgttgatttagtttttgaacatcaaggccaatactttattgccgattac
aagtcgaatcatttaggcaatcagttacaacactacaatcaccacgcaatgagcgaagcc
attaatagtcatagatataatttacaatatctgttgtataccttggcattgcaccgctac
ttaaaattgcgtttaccccattatcagtatgatgttcatattggtggctgcttttattta
ttcttacgcggaatgagccctgagtctcttggctctggagtattttttgataaaccagat
gcggcgttaatcgaccaacttgacagccttttcagtcaacccgtagggagtgaagcatgc
taa
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