KEGG   Shewanella aestuarii: HBH39_10365
Entry
HBH39_10365       CDS       T06921                                 
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
saes  Shewanella aestuarii
Pathway
saes03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:saes00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    HBH39_10365 (recB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:saes03400]
    HBH39_10365 (recB)
Enzymes [BR:saes01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     HBH39_10365 (recB)
DNA repair and recombination proteins [BR:saes03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     HBH39_10365 (recB)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PDDEXK_1 UvrD_C_2 AAA_11 AAA_25 AAA_30
Other DBs
NCBI-ProteinID: QIR14841
UniProt: A0A6G9QLX5
LinkDB
Position
PN3F2:2313742..2317464
AA seq 1240 aa
MNTPATSNKVQALDPLTLPLTGSSLIEASAGTGKTYTISGLYLRLLLGHGGQTPLTCEQI
LVVTFTNAATEELRDRIRKRIQLAYKCFLGLTVNDPFIETLYAQTVESERPIALKRFDLA
LKSLDEGAIFTIHGFCQRVLSDMAFESSLLFESEFTLDDSEYLHHAVRDFWREVCYPLPM
MMAQQIDKHFVEPEKLAAKVRRLLGASEAQPSTTPKEFVSLSQELITSINRFKLAWTAQQ
EATFELLTNLPLNGSRFGKASDGYPKLAKLFDELTNWVSYGQGLPPQKTLTQLALSDLKL
NKGGVLPTSKEAPLLAQIDDLLAMINDIIPAFLVRAQAGIKQRFIQQKNQRNLMTPDDLL
TSLAAALDANPHTLATAIAKRFPIALIDEFQDTDPLQFKIFNMVYQTPALVTLPDSDISA
NTENDANAATTPYQAAQSSLGLLMIGDPKQAIYAFRGADIFTYISARNQTQKLYNLDTNY
RSSTALVDGVNHVFNQHANPFISDAIPYDVVKTPDSANQKTLQEATPQTAALRIKILKED
PDNGLNKPTARHILASDTAAEIKRLLTEAQRGQCCIKDKPLIAKNIAVLVRDRNEAAIVK
KALSARNIGAVFLSRDSVFATNEASELALILRALANPKDEPRIRAALATSLFGYTAQQID
QFNHNEDARQQVLDEFTHWHELWVRNGIMPALLSLANDRNLVHRLLAKNAVQTPEGETEQ
TDDEEVNLDASGERRLTDFRHLGELLQQKATELDGSSALINWFEQQLIDNQGKDEQQLRL
ESEQNLVQIITIHKSKGLEYPICFIPFVSLARGGTQRPEPLLYHANGKLIWDIQGSDEAY
EQYKKETLAEDLRLLYVALTRPVYACYLYIANQSKLLKAGISSQLYETAIGYLLGIKDKN
CDGELLEKQAKALASIDAISIDEVASVPDSSVFEDNQAHNVQLSAKSTQRKMGLPWRVGS
YSGLVKHLPHEKVSPGADDEDFTQDSALVEDNPNTLALNRFSFERGANAGSFMHLVLELF
DFTQAETELEPALIEAMKQYGFDQQTWLAPLTAWYHDILHTPLIKPDHSQLCLAQLTANQ
TLVEMEFYLPISQLNATKLNALLAQYGYINNFSFDTLKGMLKGFVDLVFEHQGQYFIADY
KSNHLGNQLQHYNHHAMSEAINSHRYNLQYLLYTLALHRYLKLRLPHYQYDVHIGGCFYL
FLRGMSPESLGSGVFFDKPDAALIDQLDSLFSQPVGSEAC
NT seq 3723 nt   +upstreamnt  +downstreamnt
atgaatacacccgctacctcaaataaagtacaggcgcttgatccgttaactctgccactc
accggttcaagcttaattgaagccagcgctggcacaggcaaaacctatacgatttccggt
ttatatttacgcttactgctaggccatggcggacaaacaccgctgacttgtgagcaaatt
ctggtggtaacctttaccaatgcggcaacagaagagttacgagacaggatcagaaaacgg
atccaattagcctataaatgctttttagggctgacggtcaatgatccttttatcgaaacc
ttatatgcacaaaccgttgaaagtgaacggcccatagccttaaagcgttttgacttagca
ctaaaatcccttgatgaaggcgctatttttaccattcatggtttttgtcagcgagtgttg
tctgacatggcttttgaatcatcattattatttgagtcagagttcaccttagatgacagc
gaatacttgcatcatgctgtgcgcgatttttggcgcgaagtctgttacccactacctatg
atgatggcgcagcaaattgataagcattttgttgaacctgaaaaactagccgctaaagta
cggcgcttattaggcgcaagtgaagcgcagccatcaactacgccgaaagagtttgtcagc
ctaagccaagagctcattactagcatcaatcgttttaaattagcttggacggcgcaacaa
gaggccacctttgagttattaactaacttgccacttaacggctcacgctttggtaaagcc
agtgacggctaccctaaattagccaaattatttgatgagttaaccaactgggttagttat
ggccaaggcttacccccgcaaaaaaccttaacgcaattagccttatccgatttaaaactg
aataaaggcggagtactcccgacgtcgaaagaggccccgctgctagcgcaaatcgacgat
ttattagcgatgataaacgatatcattccagcgtttttagtacgcgcgcaagctgggatc
aaacagcgctttatccagcaaaaaaatcagcgtaatttaatgacgcctgatgatttgctc
accagtttagccgccgctttggatgctaacccgcacactttagcgaccgctatcgccaag
cgatttcccattgcattaattgatgagtttcaagatacagacccattgcaatttaaaatt
tttaatatggtttatcaaacacctgcgttagtaacactgcctgactcggatataagcgcg
aatactgaaaatgatgcaaatgctgctaccacaccttatcaagctgcacagtcaagctta
ggcttattgatgattggcgacccaaaacaagcgatttatgcgtttcgaggtgccgatatt
tttacctatattagcgctcgtaatcaaacacaaaagctctacaacttagacacgaactac
cgttcatctaccgcattggttgatggagtgaatcatgtatttaatcagcatgcaaaccca
tttattagcgatgctattccatatgatgtggtaaaaacgcctgattcagccaatcaaaaa
acactgcaagaagcaacgccacaaacagcggcattgagaataaaaattcttaaagaggac
ccagataacggcttaaataagcccactgcccgacacattttagccagtgacaccgcagcc
gaaattaaacgcttattaaccgaagcacagcgtggtcaatgttgtataaaagataagccg
ctaattgccaaaaacattgccgtattagttcgtgatagaaacgaagccgcaatcgtaaaa
aaagcactcagcgcccgtaacattggcgcagtgtttttaagccgagacagtgtatttgcc
accaatgaagccagcgagttagccctcatattacgggccctcgccaatcctaaggatgaa
cctcgtattcgcgcagcactggcaacgtcactttttggttatacggcacagcaaattgat
caatttaatcataatgaagatgcacgccaacaggtgctagatgagtttactcactggcac
gagttatgggttagaaatggcattatgcctgccctgctgagccttgctaacgatcgtaat
cttgtacatagattattggctaaaaacgccgtacaaacaccagaaggcgaaacagagcaa
actgacgatgaagaggtcaatcttgatgcatcgggcgaacgccgattaaccgattttcgc
cacttaggtgagctactacaacaaaaagccactgagcttgacggcagcagcgcactgata
aactggtttgagcaacaattaattgataaccaaggtaaagacgagcagcaacttcgtttg
gaaagcgaacaaaacttagtgcaaatcattactatccataaatcaaaaggactggaatat
cctatttgttttataccgtttgtgagtctagcccgtggcggaactcaacggccagaaccg
ctactttatcacgctaatggcaaactgatttgggatattcaaggctctgatgaagcctat
gaacaatacaaaaaagagactctggctgaagatttacgcttactttatgtcgcgttaacc
cgccctgtttatgcctgttatctctatattgccaaccaatctaagctgcttaaagcaggg
atcagctcacagttatatgaaaccgctatcggctatttattgggtattaaagataaaaac
tgtgacggcgagttacttgaaaagcaagccaaggcactagcgagtattgatgccattagt
atcgatgaggttgcaagcgtgcctgacagcagcgtatttgaagataaccaagcacacaat
gttcaacttagtgccaaatctacccaacgaaaaatgggtttaccttggcgagtgggcagt
tattccggtttagtcaaacaccttccccatgaaaaagtcagccccggagcggatgatgaa
gattttactcaagatagcgcgcttgttgaagacaacccaaacacactggcgttaaatcgt
ttcagcttcgaacgtggcgcgaatgcgggtagttttatgcacttggtattagagctattt
gattttacgcaagctgaaaccgaattggagcccgcattaattgaggccatgaagcaatat
ggttttgatcaacaaacctggttagctccgctaacggcttggtatcacgatatcctccac
acgcccttgattaaacccgatcatagccagctgtgtttagcgcaattaacggccaatcaa
accttggttgagatggagttttacttacctatcagccagcttaatgcgaccaaactcaat
gccttactcgcgcaatatggatacattaacaacttcagttttgacaccttaaaaggcatg
ttgaaaggttttgttgatttagtttttgaacatcaaggccaatactttattgccgattac
aagtcgaatcatttaggcaatcagttacaacactacaatcaccacgcaatgagcgaagcc
attaatagtcatagatataatttacaatatctgttgtataccttggcattgcaccgctac
ttaaaattgcgtttaccccattatcagtatgatgttcatattggtggctgcttttattta
ttcttacgcggaatgagccctgagtctcttggctctggagtattttttgataaaccagat
gcggcgttaatcgaccaacttgacagccttttcagtcaacccgtagggagtgaagcatgc
taa

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