Shewanella aestuarii: HBH39_10455
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Entry
HBH39_10455 CDS
T06921
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
saes
Shewanella aestuarii
Pathway
saes03030
DNA replication
saes03430
Mismatch repair
saes03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
saes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HBH39_10455 (dnaX)
03430 Mismatch repair
HBH39_10455 (dnaX)
03440 Homologous recombination
HBH39_10455 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
saes03032
]
HBH39_10455 (dnaX)
03400 DNA repair and recombination proteins [BR:
saes03400
]
HBH39_10455 (dnaX)
Enzymes [BR:
saes01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HBH39_10455 (dnaX)
DNA replication proteins [BR:
saes03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HBH39_10455 (dnaX)
DNA repair and recombination proteins [BR:
saes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HBH39_10455 (dnaX)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNA_pol3_tau_5
DNAX_ATPase_lid
AAA
AAA_22
AAA_5
RuvB_N
AAA_14
AAA_16
AAA_2
AAA_19
AAA_30
AAA_18
PIF1
AAA_7
TsaE
nSTAND3
AAA_assoc_2
Motif
Other DBs
NCBI-ProteinID:
QIR14856
UniProt:
A0A6G9QK03
LinkDB
All DBs
Position
PN3F2:complement(2337649..2340585)
Genome browser
AA seq
978 aa
AA seq
DB search
MSYQVLARKWRPAKFEQMVGQSHVLLALTNALSQQRLHHAYLFTGTRGVGKTSLARLFAK
GLNCEQGVTANPCGVCSSCEEIAQGRFVDLIEVDAASRTKVDDTRELLDNVQYRPSRGRY
KVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKSLSQ
DEIAKQLDFVLTQEQLPHEPQALTLLAKAANGSMRDALSLTDQAIAFGSGQVMFQQVQSM
LGSIDEKQVIALLKALCDADIAPLMQTVSKVLAFGADAQEVLRSLLELLHQITLTQFAPS
AAQASLYSEQILAFAQQLAPEQVQLYYQMLLAGRKDLPFAPDPKSGLEMALLRAVAFVPE
KQTKRWVTQTPAKVDLDKIESSPAENSLQHSTALTKQEVIETRPKSIVDRAVSHGNPLDT
VANTTDTIENALSANQDLIVNQDDATETRVAQHTEDNNDDDNSELVAQQAILLSQAQSLG
YQAEPRLDDSPEQTSAVAEAPSVPDVHSSENAQMALNDKSTDNASLANQVDLLSSSGKAQ
NNESHHGNDNLSEALFAASASGADNDYQDYNEMSLSFIDDEQDNQDYFDDYVAYTQQESS
DTIVATESQQPVIPQSSSADVKTEHNQSDEDPLDDILDRVIASRNALLADVNALKSGDET
SIKPSSNKTASSPLAPQKSELKQQPSTSDLAKEDLTDQLKQQANQGPLASENHLKAPLTN
DLLSVDAFQPTPIIEQEPASVALQTDSVFTTVKPINIEPNESVNTKNESYDRPPWEAPSE
AEIQQQEQDAQSLLASSKTAHVNDLAPVQPAPIENKQLEVSAQTSLSTTVHQITGNQLDL
DWYKIMAEVKVGGRVRQLGVNSLCEAIESPLKLLLKPDQKHLSAEVAIEQLQDALSNYLG
TDIQVEVEIGQNPSRETPLELRKRFHRELLQQAQQSILTDSNIQWMINHLAAQLDQDSVV
YPAEQLTGVAEQIPARLN
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatcaggtgttagcccgcaaatggcgccctgccaaatttgagcaaatggttggt
cagtcgcatgtgctattggcactgacaaacgcattaagtcagcaacgtttacatcatgct
tatttatttactggcactcgtggtgtgggtaaaaccagtttagctcgcttatttgctaaa
ggattgaactgtgagcaaggtgttacagcaaatccttgtggggtatgttcaagctgtgaa
gagattgctcaagggcgttttgtcgaccttattgaagtcgatgccgcttctcgcactaag
gtagacgatactcgtgagttgctcgacaatgtgcaatatcgtccatctcgtggtcgatat
aaagtgtacctcattgatgaagtgcatatgctttctcgaagcagttttaatgcattactt
aaaacccttgaagagccacctgagcatgttaaatttttattagcgactacagatccgcaa
aaattgcctgtcacagtattatcccgttgtctgcaatttaatttaaaaagtctttctcaa
gatgaaattgctaagcaattagactttgtattaacccaagaacaattgccccatgaacca
caagcactgacgttattagcaaaagcagctaatggcagtatgcgggatgcgctaagttta
acggatcaagcgattgcgtttggctcagggcaagtcatgtttcagcaagtacaatcaatg
ctaggtagtattgatgaaaaacaggttattgcgctattaaaagcattatgtgacgccgat
attgcaccattaatgcaaactgtgtccaaggtattagcgtttggtgctgatgctcaagag
gtattgcgcagtttattagaattgcttcaccaaattaccttaacacaatttgcgccatca
gcagcgcaagcctccttatatagcgaacaaattttagcctttgcccagcaattagcgcct
gagcaagttcaactctattaccaaatgctactagcaggccgtaaagatttgccttttgca
ccagatcctaagtcagggcttgaaatggcgttattacgtgctgtggcttttgtgccagaa
aaacaaaccaaacgttgggtcacgcaaacacctgcgaaagttgatttagacaagattgaa
tcatctccggctgagaactcgcttcaacactcaaccgctttaactaagcaagaggtcatt
gagactcgcccaaagtcgatagttgatagggctgttagccacggcaatccgctagataca
gttgctaatactaccgatacgattgagaacgcgctaagcgccaatcaagatcttatcgtt
aatcaagatgatgctactgaaacaagagtagcccaacatactgaagataataacgatgat
gacaacagcgaacttgttgctcagcaggctattttactcagtcaagcgcaaagcttaggt
taccaagcagagccgagattagatgatagccctgaacaaacttcagctgtggccgaagcg
ccatctgttcctgatgttcattcaagcgaaaatgctcaaatggcgcttaatgataagtcc
acagataatgccagtttagcaaatcaagtcgatttgttgagttcttcgggcaaagcgcaa
aataatgagagtcatcatggtaatgataatctttcagaagccctatttgcagcatccgct
tcaggtgcagacaatgattatcaagattacaatgagatgagcttatcatttattgatgat
gagcaagacaatcaagattattttgacgattatgttgcatatacgcagcaagaaagcagc
gatacgattgtagcaacagagagtcagcagcctgttataccacagtcaagttcagctgat
gtaaagacagagcataaccaaagcgatgaagatccattagatgatattttggatagggta
atcgctagtcgtaatgcgttacttgcagatgtgaatgcgctcaaatcaggtgatgaaacg
agtattaaaccaagctctaataaaacggcttcgtcaccgttagcgcctcaaaagtcagag
ttaaagcaacagccatcaacatcagatctagccaaagaagatcttacagatcaactaaag
cagcaggcgaatcaagggccattggcgagtgaaaatcatttaaaagcacctttaacgaat
gatttgttatctgttgatgctttccaaccgacaccaataattgagcaagagccagccagt
gtagcgttgcaaactgatagcgtattcactacggttaaaccaattaatattgagccaaat
gaatctgttaatactaagaatgaatcttacgatagaccaccatgggaagctccgtcagaa
gcggaaattcagcagcaagaacaagatgctcaatctttattagcatcgtctaaaactgcg
catgttaacgatttagctccagttcaaccagcaccaattgagaataaacagcttgaagtt
agtgcccagacaagccttagcaccacagtccatcaaattactggcaatcagctagattta
gattggtataaaattatggctgaggtgaaagtaggaggtcgtgttaggcaattgggcgtt
aattcattatgtgaagccattgaaagtccgctcaaattgttgctaaagcctgatcaaaag
cacctcagtgctgaagttgcaattgaacagttacaagatgcattatctaactatcttgga
actgatattcaggtggaggttgaaattggccaaaatccttcacgggagactccgttagaa
ttacgtaagcgtttccatcgcgaattattgcaacaagcgcagcaatctattttaactgac
agcaatattcagtggatgattaatcatttagctgctcaattagatcaagattcggttgtt
tatcctgcagagcaactcaccggtgttgccgagcaaattcctgcaagactaaactga
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