KEGG   Shewanella aestuarii: HBH39_10540
Entry
HBH39_10540       CDS       T06921                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
saes  Shewanella aestuarii
Pathway
saes03030  DNA replication
saes03430  Mismatch repair
saes03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:saes00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HBH39_10540
   03430 Mismatch repair
    HBH39_10540
   03440 Homologous recombination
    HBH39_10540
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:saes03032]
    HBH39_10540
   03400 DNA repair and recombination proteins [BR:saes03400]
    HBH39_10540
Enzymes [BR:saes01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HBH39_10540
DNA replication proteins [BR:saes03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HBH39_10540
DNA repair and recombination proteins [BR:saes03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HBH39_10540
SSDB
Motif
Pfam: RNase_T DEDDh_C CAF1
Other DBs
NCBI-ProteinID: QIR14865
UniProt: A0A6G9QLC3
LinkDB
Position
PN3F2:complement(2359022..2359711)
AA seq 229 aa
MVNHLWLKGRLWFDSLVTKNSLYQDYLNALTSQFNLPIAQTKLMAVDLEMTGLDPKLDQI
ISIGLIPIYQGSLPLNQARHVMIGIEGSVGHSATVHGIVDNQLADALTIEQAMAWFLKQT
QGHILVAHHAPLDIAFLQNNLASVFGQAVMLPFIDTLAIERKRYLHQHGQLIEGCLRLGQ
SRERYHLPIYAAHNALIDAIACAELLLAQLSAMGGINTIKCHELVNVAK
NT seq 690 nt   +upstreamnt  +downstreamnt
gtggttaatcatttatggttaaagggacggttgtggttcgactcgctagtaactaaaaat
agcttatatcaagattatctcaacgccttaacttcgcaatttaatctgcccattgcgcaa
acaaaattaatggccgttgatctagagatgacaggtctcgatcctaaactagatcaaatc
atcagcattggcctaattccaatctatcagggtagtttgccgttaaatcaagcgaggcac
gtcatgattggcattgaagggagtgttggtcacagtgctacggttcatgggattgtcgat
aatcagttagcagatgcattaactattgagcaagcgatggcatggtttttaaagcaaacg
caaggtcatatattagttgcccatcacgcaccattagatattgcatttttacaaaataac
ctagcgtcggtttttggccaagctgtcatgttaccttttattgataccttggcgattgaa
cgtaaacgatatctgcatcagcatggtcaattaatcgagggatgtcttcgattaggacaa
agcagagagcgttatcacttaccgatttatgcagcgcataatgccctgatagatgccatc
gcatgcgcggagttattgctggcccagttatctgcaatggggggcataaatactattaag
tgtcatgaattggtgaacgtagcaaaataa

DBGET integrated database retrieval system