Shewanella aestuarii: HBH39_10980
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Entry
HBH39_10980 CDS
T06921
Symbol
bamA
Name
(GenBank) outer membrane protein assembly factor BamA
KO
K07277
outer membrane protein insertion porin family
Organism
saes
Shewanella aestuarii
Brite
KEGG Orthology (KO) [BR:
saes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
saes03029
]
HBH39_10980 (bamA)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
saes02000
]
HBH39_10980 (bamA)
Mitochondrial biogenesis [BR:
saes03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
HBH39_10980 (bamA)
Transporters [BR:
saes02000
]
Other transporters
Pores ion channels [TC:
1
]
HBH39_10980 (bamA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA
Motif
Other DBs
NCBI-ProteinID:
QIR14942
UniProt:
A0A6G9QKF5
LinkDB
All DBs
Position
PN3F2:complement(2465817..2468300)
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AA seq
827 aa
AA seq
DB search
MRLNKLFASMLFVGASFAGNGWANTFQPFEVTDIQVEGLQRVALGAALLNLPIRVGDTVD
QTKLQQAIKSLYGSTNFESISVAHEDGVLYVTVKERPTISAVTFEGNKDIKDEQLQESLD
GSGVKIGESLDRTMLSGIEKGLQDFYYGVGKYGAKVEAQIINLPRNRVELKFNFTEGLAA
EIRQINVVGNTVFTDSELISMLELKDYVAWWDIFGERRYQKQKLQADLETIKTYYHNQGY
IRFEVTSTQVAMTPDRKGLYITINVDEGEKYKVKEVNLTGDLMGREELLRAILPLKEGNM
YNGADVTFTEEMYSKYLGRFGYAYPEVKTYPEIDDENKEVTLNVNIQPGKRVYVRSINFT
GNAVTKDEVMRRELRQMEGAWLNSAQIEQSKARLNRLGFFETVDTETIQVPGSDDLVDVA
VKVKEQPSGSFNAGVGYGTESGVSLQFGVEQNNFLGTGNQAGVSINTNKYSKSANVSYTD
PYFTKDGVSLGGSIYWNEFDANEANLERYKNKSYGVALNSGFPLNEYNRLNGGIGYRHNT
ISEISAYEQALRFYNIYRDSDDPNADLSFNNFELNAGWYRSTLNRGTFPTDGSSQRLSGK
MTIPGSDLQYFKTDFDTNFYFPLTRRHSFVVLARARLGYSNGYGKFNENDQILPFWENYY
SGGSSSLRGFKSNSVGPRSFYLIRGSEPCAPDPSGEGCSLPGEPNELYVNEGRSIGGNAI
ATASLELIVPTPFLDEAYTNSVRTSFFVDAGNVWDTEFDYDSYRTLPADEFEKLQDFSDP
GRIRASWGMSVQWLSPMGPMVFSLAWPIKEYEDDETEIFSFNIGKTF
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgagattgaataaactttttgcctcgatgttattcgtcggcgcgtcttttgcagggaac
ggttgggcaaatacattccaaccatttgaagtcaccgacattcaagttgaaggtttacaa
cgtgttgctttaggtgctgcactactaaatctgccaattcgcgttggtgatacagtcgat
caaactaaattacaacaagcgattaaaagcttatatggttcaactaattttgaatcgata
agtgtagctcacgaagatggggttctgtacgtcaccgttaaagaacgccccaccatcagt
gcggtgacctttgaaggtaacaaagatatcaaagacgagcagttacaagagagccttgat
ggttcaggtgtaaaaattggtgagtcgttagatcgcaccatgctttctggtatcgaaaag
ggcttgcaggacttttactacggtgtgggtaaatacggcgccaaagttgaagcgcaaatt
atcaacttacctcgtaatcgtgttgagcttaagttcaattttaccgagggtttggcggct
gaaattcgacaaatcaatgtagttggtaatacggtattcactgactctgaattaatcagc
atgcttgagttgaaagattatgtagcatggtgggatatatttggtgagcgccgttatcaa
aaacaaaagcttcaagctgatttagaaaccattaagacctattaccacaatcaaggttat
atccgctttgaggtaacatcgactcaagtggcgatgacacctgatcgaaaaggtttatat
atcaccatcaacgttgatgaaggtgaaaaatataaggttaaagaagttaacttaaccggt
gatttaatgggccgtgaagaattactaagagccattttgccactgaaagaaggcaatatg
tataacggtgctgatgtgaccttcactgaagagatgtacagtaagtatctaggccgtttt
ggttatgcataccccgaagtaaaaacttatcctgaaatcgacgatgagaataaagaagtt
actttaaacgtcaatattcaacccggtaagcgtgtttatgttcgtagtattaactttacg
ggtaatgctgtaaccaaagatgaagtgatgcgtcgtgagcttcgtcaaatggaaggggca
tggttaaactctgcgcagattgaacaatcaaaagcgcgtttaaaccgtttaggctttttt
gaaacggttgatactgaaacaatccaagtaccgggaagtgacgacttagttgatgttgct
gttaaagtgaaagaacaaccatctggctcatttaatgccggtgttggttacggcactgaa
tctggtgtgagtttacagtttggtgttgagcaaaataacttcctcggtacgggtaaccaa
gccggcgttagcatcaatactaacaagtattcgaaaagtgctaatgtgtcttacactgat
ccttactttaccaaagatggtgtgagtttagggggaagtatttattggaacgagtttgac
gccaacgaggctaaccttgaacgctataagaataaatcttatggtgttgcgcttaactct
ggttttccgcttaacgaatacaaccgcttaaatgggggcattggttatcgtcataacaca
atttctgaaatctcagcttatgagcaagcactgcgtttttataacatctatcgtgacagc
gatgatcccaatgcagatttaagtttcaataactttgaattaaatgctggctggtacaga
agcaccttaaaccgcggcacgttcccaaccgatggttcatcgcaacgcttaagcggtaaa
atgacgatacctgggtcagatttacagtatttcaaaacggactttgacactaacttctat
ttcccgttaacgcgccgtcatagtttcgttgtgttagctcgtgctagattaggctactct
aacggttatggtaagtttaatgaaaatgatcaaattttacctttctgggaaaactattac
tcaggtggtagtagctcattacgtggttttaaatcaaattctgtaggtccacgttcattt
tacttaattcgtggtagcgagccttgtgcgcccgatccatctggcgaaggttgtagttta
cccggtgagcctaatgagctttatgtgaatgaaggccgttcaattggtggtaatgccatt
gcaacagccagtcttgagttaattgtacctacgccgttcttggatgaagcatatactaat
tcagtgcgtaccagtttcttcgttgatgccggtaacgtatgggatactgagtttgattat
gattcctatcgcactttacccgctgatgaatttgagaagcttcaagacttcagtgaccca
gggcgcattcgtgcatcatggggtatgagtgtgcagtggttatcacccatggggccgatg
gtatttagccttgcatggccgattaaagaatatgaagacgatgaaactgagattttctcg
ttcaatattggcaaaacgttctaa
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