Shewanella aestuarii: HBH39_12750
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Entry
HBH39_12750 CDS
T06921
Symbol
nhaR
Name
(GenBank) transcriptional activator NhaR
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
saes
Shewanella aestuarii
Brite
KEGG Orthology (KO) [BR:
saes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
saes03000
]
HBH39_12750 (nhaR)
Transcription factors [BR:
saes03000
]
Prokaryotic type
Helix-turn-helix
LysR family
HBH39_12750 (nhaR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
Motif
Other DBs
NCBI-ProteinID:
QIR15245
UniProt:
A0A6G9QMF4
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All DBs
Position
PN3F2:complement(2898722..2899654)
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AA seq
310 aa
AA seq
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MQHLNYNHLYYFWMVKRKGSVTKAAEALCLTPQTITGQIRLLEERLNGSLFKRVGRGLEA
TELGELVFRYADKMYNLSYEMLDLLNYQQDDSVLFEVGIADALSKALVSRVLLTVLPHDG
SMHLACYESTHESLIERLREHKLDMILSDCAGESLKYSDILSKKLGECGVSFFCAHPLAA
EFPACLEQEKLLIPGIRTSLGQQLHRWFAEKNLNVSILGEFDDAAMMKAFGYFKRGIFVA
PSIYRHDILSQGMVLLGETTDIKEEYHVMFAERMIQHPAVKLLLETDFTELFAGNDQQVQ
DFDNRLGLAD
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgcagcatcttaattataatcacctttactatttttggatggtgaaacgcaaaggctca
gtgactaaagccgctgaagcgttgtgcttaactccacagactattacaggtcaaattcgc
ttattagaagaacggctaaatggctcacttttcaagcgagttggtagagggcttgaggcg
actgaattaggcgaattagtttttcgttatgcagacaaaatgtataacttaagctacgaa
atgcttgatcttctaaattaccagcaagatgattcggtgttgtttgaagtaggtattgca
gatgcattatctaaagcgttagtcagtagggtgttactgactgtactcccccatgatggt
tcaatgcatttagcttgttacgagtcgacacatgaaagcttaatcgagcgattacgtgag
cacaagcttgatatgattttgtctgattgcgctggcgaatcgttaaaatacagtgatatt
ttatctaaaaaattaggtgaatgcggtgttagttttttttgtgctcatccattagccgca
gagtttccagcctgtttagagcaagaaaaattacttattccaggcattcgaacctcactt
ggtcaacagttacatcgttggttcgctgaaaaaaatcttaatgtgagtatattgggggaa
tttgatgatgccgcaatgatgaaagcttttggttatttcaaacggggtatttttgtcgca
ccgtcgatatatcgtcatgatatactgtcgcaaggaatggttttgctgggtgaaaccacc
gatataaaagaagaatatcatgtcatgtttgctgagcggatgattcaacatccagcagtg
aaattgctactagaaactgactttactgaattgtttgcgggtaatgatcaacaagtgcaa
gattttgataatcgcttaggattagctgactaa
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