KEGG   Shewanella aestuarii: HBH39_12780
Entry
HBH39_12780       CDS       T06921                                 
Symbol
rppH
Name
(GenBank) RNA pyrophosphohydrolase
  KO
K08311  putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
saes  Shewanella aestuarii
Pathway
saes03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:saes00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HBH39_12780 (rppH)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:saes03019]
    HBH39_12780 (rppH)
Messenger RNA biogenesis [BR:saes03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     HBH39_12780 (rppH)
SSDB
Motif
Pfam: NUDIX Nudt16-like NUDIX_4
Other DBs
NCBI-ProteinID: QIR15251
UniProt: A0A6G9QN51
LinkDB
Position
PN3F2:complement(2905808..2906329)
AA seq 173 aa
MIDSDGFRANVGIIICNKFGQVMWARRFGQHSWQFPQGGLDDGETAEQAMYRELYEEVGL
RPEHVQILTTSRSWLRYRLPKRLIRQESKPVCIGQKQKWYLLQLKGHDNTINLNSSGHPE
FDDWRWVSYWYPVRQVVSFKRDVYRKVMKEFAATTLALQTREPHNKKRGRNRS
NT seq 522 nt   +upstreamnt  +downstreamnt
gtgattgatagcgacggctttcgcgcaaatgtgggcatcattatctgtaataagtttggt
caagtaatgtgggcaagacgatttggtcaacattcttggcaatttccacaaggtgggctt
gatgatggcgaaactgctgagcaagctatgtatcgtgaattgtacgaagaagtcggctta
aggcctgaacatgttcaaattttaacaacttcgcggtcatggttacgttatcgtttacct
aaacgtctgattcgtcaagaaagtaagcctgtgtgtatcggccaaaaacagaaatggtat
ttgctacaacttaaaggtcatgacaatacaattaatttaaactcatcaggtcatcctgag
tttgatgattggcgttgggtaagctattggtatcctgttcggcaggtggtgtcatttaag
cgtgatgtatatcgaaaagtaatgaaagaatttgcagccacgacactagccttgcaaaca
cgagagccgcataacaaaaaaagaggtcgtaatcgcagttaa

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