Shewanella aestuarii: HBH39_13130
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Entry
HBH39_13130 CDS
T06921
Symbol
dinB
Name
(GenBank) DNA polymerase IV
KO
K02346
DNA polymerase IV [EC:
2.7.7.7
]
Organism
saes
Shewanella aestuarii
Brite
KEGG Orthology (KO) [BR:
saes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saes03400
]
HBH39_13130 (dinB)
Enzymes [BR:
saes01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HBH39_13130 (dinB)
DNA repair and recombination proteins [BR:
saes03400
]
Prokaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
HBH39_13130 (dinB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
IMS_C
IMS_HHH_1
IMS_HHH
DNA_pol_lambd_f
Cdd1
POLH-Rev1_HhH
HHH_5
HHH
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
QIR15312
UniProt:
A0A6G9QLG2
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All DBs
Position
PN3F2:complement(2987227..2988300)
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AA seq
357 aa
AA seq
DB search
MRKIIHIDMDCYFAAVEMRDFPELRDKPVAVGGSSDRRGVISTCNYAARKFGVRSAMSSY
QALKLCPDLVLVRGRMQVYKEVSQQIRQIFQRYSDLIEPLSLDEAFLDVTDCVLYHGSAT
LIAKAIRADIEAETGLTASAGVAPIKFLAKIASDLNKPNGQYVIPPENIPEFIKTLPLRK
IPGVGKVTAQKLSDLGLETCADVQDYPQHKLLDKFGKFGAVLIERANGIDPRAISNNRLR
KSVGVETTLAQDIFTLAQCHQVLPQLIQELDARVSRSAKDRQINKQVVKIKFHDFKQTTI
EQRSDGISVNLFYSLLAQAFLRSNGRGIRLLGVSVGLAETDEKKLQTKSVTQLDLQF
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaaaattattcacattgatatggattgctactttgccgccgttgaaatgcgtgat
tttcctgagctacgcgataaaccagtggcggttggcggcagctcagatcgccgaggggtg
attagcacctgcaattatgctgcgcgtaaatttggtgtgcggtctgcaatgtcgagttat
caagcattaaagttatgtcctgatttagtgttagtgcgcggtcgaatgcaggtttacaaa
gaggtgtcacagcaaattaggcagatatttcagcgttacagtgatcttattgagccgtta
tcgttagatgaagcatttttagatgtgactgattgtgtgctgtaccacggtagtgctacg
ttaattgccaaagccatccgtgcagacattgaagctgagaccggcttaacggcttcagcg
ggcgtcgcgccaattaagtttctcgccaaaattgcgtctgatttaaataaacctaatggt
caatatgtgatacccccagaaaacattcctgagtttattaaaaccctaccgctgagaaaa
attcctggtgtgggcaaggttactgcgcaaaagctttccgatttagggctggaaacttgt
gccgatgtgcaagattatcctcagcataaattactcgataaatttggtaaatttggtgca
gtattgatcgagcgtgcaaacgggattgaccctcgcgcgatcagtaataatcggcttaga
aaatcagtgggagttgaaaccaccttagcccaagatatttttacgctagcgcaatgccac
caagtgttaccgcaattaattcaagagctagacgctcgagtcagtcgtagtgccaaagac
agacagatcaataaacaggtggtaaagataaagtttcatgactttaaacaaactaccatt
gagcagcgcagtgatgggatatcagtaaacttattttatagcttgttagcgcaagccttt
ttacgcagtaatggtcgcgggatccgcttgcttggtgtgagtgtcggtttggcagaaaca
gatgaaaaaaaactgcaaactaagtcagttacccaactcgatttgcagttttaa
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