Shewanella aestuarii: HBH39_14040
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Entry
HBH39_14040 CDS
T06921
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
saes
Shewanella aestuarii
Pathway
saes00550
Peptidoglycan biosynthesis
saes01100
Metabolic pathways
saes01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
saes00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HBH39_14040 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HBH39_14040 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
saes01011
]
HBH39_14040 (mrdA)
Enzymes [BR:
saes01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
HBH39_14040 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
saes01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
HBH39_14040 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
DUF5858
PAS_7
Motif
Other DBs
NCBI-ProteinID:
QIR15475
UniProt:
A0A6G9QN27
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All DBs
Position
PN3F2:3185010..3186869
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AA seq
619 aa
AA seq
DB search
MPPKKRITIHDHAAEASLFKRRALFTFVCVFILLSVLLSNLYQLQVVSYKDYETRSNDNR
IRVVPTPPSRGLIFDRHGQLLAENQPYYSLEMIPERIKNLDETFDKLNEIIEISDEERQN
IKETLKFHRRFKPLTLKNKLTEQQVASFTVNQHQFPGIYVEAGLKRHYPHTELMTHVLGY
VGKINSRDKAMLEKNNNWKNYAATKDIGKQGIEKFYESLLHGLPGHLEEEVNNRGRVIRT
LKVTPPTPGQDIYLTLDLKLQQKAMELLAGRRGSVVAIDPRDGGILAMVSSPSYDPNQFV
HGISSKAYSDLLNDKSRPLINRSTQGQYAPASTVKPLVALLGLDERTISDRTRVWDPGFW
QMPGVERKWRDWKKWGHGWVDVYHAIIDSCDIFFYDLVYKVGIDKLSPFMAQFGFGESTG
VDIFEESAGVMPSRDWKRLRYNQPWYNGDTISVGIGQGYWTSTPLQLANATAILANKGQR
FTPHLLKSFKDDTVKIDTPIDEQPPIEIKNPKNWDIITEAMRLTADKSRFTDAKYTAAMK
TGTGQVFSVAQDQKYDAETVAEHLRDNALIVAYAPFENPTIVLAVVLENAGWGGVNAGPV
ARALLDEYLLRDEWTIPSE
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
gtgccgccaaagaagcgcatcactatccatgatcacgccgcagaagcctcattattcaag
cgtcgcgcattgttcacttttgtgtgtgtatttattctgttaagcgttttactctctaac
ctttatcagcttcaagttgtttcttacaaagattacgaaacccgctctaatgataatcgt
attcgtgtcgtacccacgccaccaagccgcggcttaatctttgatcgtcatggccagtta
ctagcagaaaatcagccctattattctttagaaatgatccccgagcgaataaaaaacctt
gatgagacttttgacaagctcaatgagatcatagaaatcagtgatgaagagcgccaaaac
atcaaagaaaccttaaagtttcaccgtcgtttcaaaccactaaccttaaaaaataagctt
actgaacagcaggttgcaagtttcactgttaaccaacaccaatttccgggcatttatgtt
gaagccggtttaaaacgtcactacccccatacagagctaatgacccatgttctaggatat
gtgggaaaaataaatagccgtgataaagccatgcttgaaaaaaataacaactggaaaaat
tacgccgcaacaaaagatattggcaaacaaggtattgaaaagttttacgaaagtttattg
catggattgcctggccacttagaagaagaagtgaataaccgtggccgcgttattaggaca
cttaaagtcaccccacccacaccagggcaagatatctatttaacccttgatttaaagctg
caacaaaaagccatggaattattagcgggcagacgcggttcagtcgtggcaatagaccct
cgagacggtggtattttagccatggtgtcaagcccatcgtacgatcctaaccaatttgtt
catggtattagcagcaaagcctatagtgatttgcttaatgataaatcacggccactcata
aaccgctcaacccaaggccaatacgcccccgcatcgacagtcaaacccttagtggcgtta
ttagggctagatgagcgcaccattagtgatcgaacccgcgtttgggacccgggtttttgg
caaatgcccggcgttgaacgaaaatggcgcgactggaaaaaatggggccatggatgggtt
gatgtttatcatgccattatcgattcctgcgatatcttcttttacgatttagtctataaa
gtgggcattgataagttatctccctttatggcgcaatttggatttggtgaaagcaccggc
gttgatatctttgaagaatcagcaggcgtcatgccttctcgagattggaaaagactccgt
tacaaccaaccctggtataacggcgacaccatatcagttggtattggccaaggttactgg
acaagcacaccattgcaattagctaatgcaaccgcaattttagcgaataaaggacagcgt
tttaccccgcacttactcaaatcgtttaaagatgacacggtaaaaattgatacgccaatc
gatgagcaaccaccgattgaaataaaaaaccctaaaaactgggacattatcactgaagcc
atgcgactaacagcagataaatcccgctttacagatgcaaagtacaccgcggcaatgaaa
accggtacagggcaagtattctcagtagcacaagatcaaaagtacgatgccgaaaccgta
gcggagcatctacgagataatgcacttattgttgcctatgctccttttgaaaaccctaca
attgtcttagcagtcgtacttgaaaatgctggttggggtggggttaacgcaggccctgta
gcacgcgcattacttgacgaatatctattgcgcgatgaatggacgataccaagtgaataa
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