Shewanella aestuarii: HBH39_14340
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Entry
HBH39_14340 CDS
T06921
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
saes
Shewanella aestuarii
Brite
KEGG Orthology (KO) [BR:
saes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
saes03036
]
HBH39_14340 (xerD)
Chromosome and associated proteins [BR:
saes03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
HBH39_14340 (xerD)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_5
Phage_int_SAM_4
Integrase_1
DUF3435
Motif
Other DBs
NCBI-ProteinID:
QIR16243
UniProt:
A0A6G9QQ53
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All DBs
Position
PN3F2:complement(3264553..3265440)
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AA seq
295 aa
AA seq
DB search
MLNPLIEQFIDDLWSTKGLSDNTLSSYRTDLAHFERFVLSRRKSLIEVDCLLIRDYLTYR
FDKQFAKTSTARLLSSLRRFYGFLVISKMMTEDPTALIESPKLARKLPDALTEAQVDSLL
SEPNVDDPIERRDKAMLELLYATGLRVTELVSLTMDQISLRQGVVRVMGKGGKERLVPLG
ELAIAEVEQFIKTARPELLNLKQSDVLFPSKRAQMMTRQTFWHRIKLYAARAGINSHLSP
HTLRHAFATHLLNHGADLRVVQLLLGHSDLSTTQIYTHVAKARLQQLHQQHHPRG
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
attcttaacccattgattgaacaatttattgatgacttatggtctactaaaggcctgagt
gataataccttgtcttcatatcgtaccgatttggcccactttgaacgttttgtgttgagc
cgtcgtaaatcgttaattgaggttgattgcttattaataagggactatttgacgtatcgt
tttgataagcaattcgccaaaaccagtaccgcgagattacttagtagtttacgtcggttt
tatggttttttagtgatcagtaaaatgatgaccgaagatcctaccgccttgattgaatca
ccaaagcttgccagaaaactgcctgatgcattaacagaagcgcaggttgacagtttgttg
tcagagcccaatgttgatgacccaatagagcgtcgtgataaagcgatgctggaattgtta
tacgcaacagggcttagggtaactgaattagttagcttgaccatggatcaaatcagtctt
cgtcaaggtgttgtgagggtgatgggtaaggggggaaaagagcgacttgtaccattaggt
gagcttgctattgcagaagtcgaacagtttataaaaacagcccgacctgagctattaaac
cttaaacaatcagatgtgttgtttccttctaagcgcgcgcaaatgatgacaaggcaaacc
ttttggcatcgtattaagttatacgcagcaagggcggggataaactcgcatttgtcgccg
catacattgcgccatgcttttgctactcatttattaaatcatggtgcagatcttcgagtt
gtacagttattactgggccacagtgatttatcgaccactcaaatttatacccatgtggct
aaagcaaggttgcaacaattgcatcaacagcatcacccacgtggttaa
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