Shewanella aestuarii: HBH39_14915
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Entry
HBH39_14915 CDS
T06921
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
saes
Shewanella aestuarii
Pathway
saes00630
Glyoxylate and dicarboxylate metabolism
saes00680
Methane metabolism
saes01100
Metabolic pathways
saes01120
Microbial metabolism in diverse environments
saes01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
saes00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HBH39_14915 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
HBH39_14915 (fdhF)
Enzymes [BR:
saes01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
HBH39_14915 (fdhF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Pyr_redox_2
Molydop_binding
Fer4_20
Molybdop_Fe4S4
Pyr_redox
Pyr_redox_3
Fer2_4
Fer4_7
Fer4_9
NAD_binding_8
Fer4
FAD_oxidored
DAO
NAD_binding_7
HI0933_like
Fer4_6
Fer4_8
Fer4_16
Fer4_Nqo3
Fer4_18
GIDA
Amino_oxidase
FAD_binding_2
Fer4_10
Lys_Orn_oxgnase
Fer4_21
AlaDh_PNT_C
FAD_binding_3
Fer4_2
Fer4_17
2-Hacid_dh_C
Thi4
Fer4_15
Motif
Other DBs
NCBI-ProteinID:
QIR15618
UniProt:
A0A6G9QMJ2
LinkDB
All DBs
Position
PN3F2:3410564..3414811
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AA seq
1415 aa
AA seq
DB search
MIKLSFDGKTATAAPGENLLTCAINAGVAIPHLCHHTQSATNQSTHSLQDKQSCGLCYVE
LTDNSGNRSTVKACETAITETITVVTHSVALSKIRQASLKNLLSDHFADCEAPCQQACPA
GVDVQSYLYQIAQGNHREAVKIIKQTLPLPLSIGRVCPAFCESACRRGELDEPLAIRQLK
RHAADIDLQGDSYVPTKLANTGKKIAIIGSGPAGISAGFYLSNAGHEVTIYESMPKAGGW
LRYGIPEYRLPKAILDQEIDLLCKNGMKIQTNTRLGTDIHLNDLVESFDAVCLAIGAQKA
VPMNYPGVELDGCYLGVDYLKDHCTEKRYTTGRKVAVIGGGNTAIDCARTALREGAEVTL
VYRRTRDEMPAEDYEIEEAEHEGIRFYFLTNPIENHADSAGRINAVTFEKMALGEPDASG
RRSPKATGETFVEAFDTVIPAVSQTPDMSFLSDPASCLTNGELALTRWNTFSGCEYTMSS
GIEKLFVLGDSRTGPATAVAAVADGKKAADAIQKLLDGELSCDLIAKPFNSEKRQHKALD
LSHFPTRLHQAKAKMPELAMNARSASFDEIELGFKDEIALAEAARCLECGCQANTDCQLR
DYASQYHVDGKAIDGQQHRAFVQDSSSPFITFDPNRCISCGACVAMCHQQAGHNAICFEA
DSYLALPQGATADTLRQAPRVGFSASMADSQCVQCGNCVQVCPTGALTDARDKAQGRKTQ
LKQTSTICTYCGIGCRVTLHTDPVNNHIMHVSADNHSPVNDGMLCVKGRYGFDFINSQQR
LTSPLLRKNGQLVEVSWDEATQFIANKLISIRAEHGSNAIAGLASAKATNEDNYLFQKFF
RTVIGTNNIDHCARLCHASTVTALRESLGSGAMTNNIPSIKSSDLIFILGSDTSVAHPII
ASKIKQAVHQHGARLVVADPKKVAIADDAQLYLCHRPGTDVMLLNAIMQQIIIHNWHDKD
YIQQRVEGFNQLSAEVMKPDYSLENAALITGVAADKIKQLAELIGTAEKTAIYYAMGITQ
HTSGHDNVTAIANLQLLCGNIGIEGAGINPLRGQSNVQGACDMGALPNYYSGYQKVDDIG
VQQRFSQAWQHPNLSPTIGLAATEMMHALAHGQLKALYVMGENPVLSDPDQAHVLKGLAA
AELLVVQDIFMTETAQLADVVLPAASFAEKQGHFTNTERRVQQLQPAIASPGKARLDWQI
IMDIANKMAANWHYQDERQIWHEVTQVTPQYRGISWQRVDAQTKEGRLGVQWPCPTEGHL
GTPILHVDQFTHGKGKMKPVSYRLPAEMPCNEYPFVLSTGRLLEQFHTGTLTRKTEGLNE
LATPKVMISAFDADQLAITNGDMLTLSTRRGSINIAAFVTKRAQAGVLFLPFHFAEAAAN
KLTNNVLDPVAKIPEFKVCAVKVEKVCQPVESMNV
NT seq
4248 nt
NT seq
+upstream
nt +downstream
nt
atgataaagctcagtttcgacggtaaaaccgctacagcagcaccaggtgaaaacctgctc
acctgcgccatcaatgctggcgttgcgattccccatttgtgtcatcacactcagtctgca
actaatcaatcaactcacagcttacaagacaaacaaagctgcggactgtgctatgttgag
ttaaccgataacagtggcaatcgaagcacagtaaaagcgtgcgaaaccgctatcaccgaa
accatcacagtcgtcacacactctgttgccttaagcaaaatacgccaagcatcactcaaa
aacctgttaagcgatcactttgccgattgcgaagcgccttgccagcaagcctgccccgct
ggtgttgatgtgcaatcttatctttatcaaatcgcacagggaaatcatcgtgaagccgta
aaaattattaagcaaaccttaccgcttcccttgtctatcggtcgcgtatgtcctgcgttt
tgtgagtcagcttgtcgacgtggtgaattagacgagccattagccattaggcaattaaaa
cgccatgcggctgatattgatttacaaggcgatagctatgttccgactaagcttgctaac
acaggtaaaaaaattgccattattggtagcgggcctgcgggtattagtgccggtttttat
ctatcgaatgccggacatgaagtcacaatttatgagtcaatgccaaaagccggtggctgg
ttaagatacggtattcctgagtaccgtttgcctaaagcgattctcgatcaagaaattgat
ttattgtgtaaaaatggcatgaaaattcaaaccaatacccgtttaggcacagatattcac
ctgaatgacttagtggagtcctttgatgcagtgtgtttagccataggcgcgcaaaaagca
gtgccaatgaattaccctggagtcgaacttgacggctgctaccttggggtagattacctg
aaagatcattgcaccgagaaacgttataccacaggtagaaaagtcgcggtgatcggcggt
ggcaataccgccattgattgcgctcgtaccgcacttcgcgaaggcgcagaagtcacctta
gtttatcgccgcacccgcgatgaaatgcctgcagaagattacgaaattgaagaagcagaa
catgaagggatccgtttttattttctaaccaatcctattgaaaaccatgccgacagtgct
ggccgtattaatgcggtgacttttgaaaagatggcattaggcgaaccggatgcatctggc
cgacgctcacccaaagctacaggtgaaacctttgttgaagcttttgatactgttattcct
gcggtatcgcaaacgcctgatatgtcatttttaagcgatccagccagttgccttaccaat
ggtgaattagcattaacgcgctggaataccttttcaggctgtgaatacaccatgtcatct
ggcattgaaaagctatttgttttaggggattctcgcactggccccgccaccgctgttgca
gccgtagcggatggcaaaaaagccgctgatgccattcaaaaactgctcgatggcgagcta
agctgtgacttaatagccaagccatttaactcagaaaaacgtcaacataaggcgttagat
ttgagtcactttccaacacggcttcatcaagccaaagctaaaatgcctgagctggccatg
aatgcaagaagtgccagttttgatgaaattgaattaggcttcaaagatgaaatcgcattg
gctgaagccgcccgttgtcttgagtgcggctgtcaggccaatactgattgccagttaaga
gactacgccagccagtatcatgttgacggaaaagccattgatggtcagcagcatcgagca
tttgtgcaagatagcagttcgccctttattacctttgaccccaaccgctgtatcagttgc
ggggcttgtgtcgccatgtgccaccagcaagccggccataatgccatttgttttgaagcc
gacagttacctagcattaccacaaggcgccacagctgacactttacgtcaagcaccgcga
gttggttttagcgcctctatggctgacagccaatgcgttcaatgtggcaactgcgtccaa
gtttgtccaacaggtgcgttaacagatgctcgcgataaagcccaaggtcgtaaaacacaa
ctaaaacaaacctcaaccatttgcacctattgtggcattggttgtcgtgtcacattgcat
actgatcctgtcaataatcacattatgcatgttagcgctgacaatcactcgccagtaaac
gatggcatgctgtgtgtcaaagggcgttatggctttgattttattaacagccaacagcga
cttacatcaccactattgcgtaaaaatgggcaattggtcgaagtcagttgggatgaagcc
acgcagtttattgccaacaaactcatcagcattcgcgctgaacatggtagtaacgccatt
gcggggctagcatctgctaaagcgaccaatgaagataactacctatttcaaaagtttttc
agaacggtcattggtaccaataatatcgatcactgcgcgcgtttatgtcatgcatcaacg
gttacggcactgcgagagtctcttggcagcggtgccatgaccaacaatattccctcaatt
aaatcatctgacttaatctttattttaggctctgataccagtgtggctcaccctatcatt
gcctctaaaattaaacaggccgtacatcaacatggcgcaaggttagtggtggctgatccg
aaaaaagtcgccatagcggatgatgcccaactctatttatgccatcgccccggtacagat
gtcatgttgcttaacgccatcatgcagcaaattattattcataattggcacgataaagat
tacattcagcagcgcgtggaaggctttaaccagttgtccgcagaagtcatgaaaccagat
tacagccttgaaaatgctgcgctaattactggggttgctgctgataagataaaacagtta
gctgagcttatcggcaccgcagaaaaaaccgcgatttattatgcgatgggaatcacccaa
cacacttcaggccacgataacgttaccgccattgctaacttgcagttactgtgcggcaat
atcggaattgaaggcgcgggcattaacccactacgaggccaaagtaatgtacaaggtgct
tgcgatatgggggcattaccaaactattacagcggttatcaaaaagtggatgacataggt
gtgcagcagcgattctcgcaagcttggcaacaccccaacttatcgccaaccattggtctt
gccgctaccgaaatgatgcatgctttggctcatggtcaattaaaagccttgtatgtgatg
ggtgaaaacccagtactgagcgatccagatcaagcccatgtactcaaaggcctagcagcc
gctgagctgttagtggtacaagacatctttatgaccgaaaccgctcagcttgctgatgtg
gttttacccgctgccagttttgctgaaaagcaaggtcactttaccaatactgaacgccgc
gtacagcagttacaacctgcaatagcctcaccgggtaaggcacgtcttgattggcaaatc
attatggatattgcgaataaaatggccgcgaattggcactatcaagatgaacgacaaatt
tggcatgaagtcactcaagtcacaccacaataccgtggtattagctggcaacgtgtggat
gctcaaaccaaagaaggtcgacttggtgtgcagtggccttgcccaacagaaggccatttg
ggtacgcctattttgcatgtggatcaatttacccacggcaaaggcaaaatgaagccagta
agctaccgtttacccgctgaaatgccatgtaatgagtatccatttgtattgtctactggc
cgtttgctggagcaattccataccggtactctcacccgtaaaaccgaaggtttaaatgag
ttagccacgccaaaagtcatgatatcggctttcgatgcggaccaattagccattactaat
ggtgatatgctgacattatctacccgacgaggcagtattaatattgccgcatttgtgact
aagcgcgcccaagctggagtgttgttcttacccttccattttgctgaggccgctgccaat
aaactcaccaataacgtacttgatcccgtggcaaaaattcctgaatttaaggtatgcgca
gtcaaggtcgaaaaggtctgtcagcctgtggaatcgatgaatgtttaa
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