Shewanella aestuarii: HBH39_14925
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Entry
HBH39_14925 CDS
T06921
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
saes
Shewanella aestuarii
Pathway
saes00040
Pentose and glucuronate interconversions
saes01100
Metabolic pathways
saes02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
saes00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
HBH39_14925
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HBH39_14925
Enzymes [BR:
saes01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
HBH39_14925
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GFIT
Motif
Pfam:
Pectate_lyase_4
CBM_35
CBM_35_2
Motif
Other DBs
NCBI-ProteinID:
QIR16254
UniProt:
A0A6G9QNU0
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All DBs
Position
PN3F2:3417766..3419772
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AA seq
668 aa
AA seq
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MAAGLTGNSFTDYNVADGNYYYSVKITGDDGTKYNSSAVAANVQTSSSVTETFEENANGF
CSVDGAIENDHSGYYGVGYANTDNESGKGVDYAISVPSAGNYRISFRYANGASDRPAALL
INDTLAASFAFTGTGAWSAFTSTNEISVQLRAGNNLVRLQATGSSGLANIDSLAVTGVAP
TAGDCNGGGVIIEPPVDPVDPTDPVYPNADCADLINNDSINWRESSLQSDQQIIQCLAES
LGKPVGYGEKATGGYNPNGGSKLVIITNNKPEDQILAAISSSDHNWIVFDKDDFANETAI
MMYRPYCASSSMQSALGVNEATCRDPYAWCAAKGVSSSNCLVTFFNDELNDSSLPVRNYL
INSNTTIDGRGAKATFTFNGFKIGADSSGASTHQSENVIITNNKFIGVGHTEDHNLDPDM
IRSTGESHDIWIHQNTFDTTGDSAFDVKVGAHDITVSFNKLINVKRAALHGSSDSRPINQ
QITTTIHNNLFVTTDDNFGSSSYNTLRRVPLLRRGQTHMFNNVFYGYRKDVMSLRVGARA
LLDDNLFMNPVNNSKGDDLADWALSLFDDAIQDGSLEINNSYVFESDSTCSTSGNSASLD
MAQGSVPNMLADYNSASKNAINSNKLSVGTDLRNYVMATAGKGAKTPWLSSYSEGKNNII
AAAPNSCQ
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
attgcggcagggctaacaggcaatagtttcactgattacaatgtggcagatggcaattac
tattactcggtgaaaataactggtgatgacggcaccaaatacaactcatcggcagtggcc
gctaatgtacaaaccagttctagtgtcactgaaacatttgaagagaatgccaatggcttc
tgctcagttgatggtgcaatagaaaacgatcactctggttattatggtgtcggctatgcc
aacacggataatgaatcaggtaaaggcgtggattacgcgatatcagttccatcagcgggt
aactatcgcatttcgttccgttatgccaatggcgcaagtgatcgcccagcagccttatta
attaatgacactttagcagccagcttcgcatttaccggcactggagcatggagtgcattt
acatccactaacgagataagcgttcagcttcgtgcgggcaataatcttgtacgcttgcaa
gcaactggcagcagtgggttagccaatattgatagcttagcggtcactggcgttgcccca
acggcaggtgactgtaatggcggtggagtaattattgagccaccggttgatcctgtcgat
cctactgatcctgtataccctaatgctgactgtgctgatttaattaataatgattcaatc
aactggcgtgaatcatcattacaatctgatcagcaaatcattcaatgtctagctgaatca
ttaggtaaaccagtgggatatggtgaaaaagccactggaggttacaaccctaatggcggc
agtaagttggttatcatcaccaataataaaccggaagatcaaattttagcggcaatttca
tcaagcgatcacaattggattgtgtttgacaaagatgactttgcaaacgaaaccgcaatt
atgatgtatcgcccatattgcgccagtagctcaatgcaatcggcactgggtgtcaatgaa
gcaacctgtcgcgatccctatgcttggtgtgcagctaaaggcgtatctagctcaaattgt
ctagtcactttttttaatgacgaattaaatgacagcagcctgccggttcgtaactactta
atcaatagtaataccaccattgatgggcgcggtgcaaaagccacatttacctttaacggc
tttaaaatcggcgctgatagtagtggtgcttcaacccatcagtcagaaaatgtcatcatc
accaataataaatttatcggtgtaggtcatacagaagatcacaatcttgaccctgacatg
atccgctcgaccggtgagtctcatgatatttggatccaccaaaatacctttgacaccaca
ggcgattcagcctttgatgttaaagttggagcacacgacatcacagtatcatttaataag
ctgattaacgttaagcgtgcagctttacatggctcaagcgatagtcgcccgataaaccaa
cagatcactaccaccatacataataacttgtttgttaccacggatgataacttcgggtct
agctcatataacaccttacgtcgcgtccccttactgcgccgtggtcaaacgcatatgttc
aacaatgtcttttacggctatcgtaaagacgttatgagcttacgggttggcgctagagca
ttgctggatgacaacttgtttatgaatccagttaataactcaaaaggtgatgatttagcg
gattgggctttatcgttatttgatgatgctattcaagatgggtcattagaaatcaataac
agctacgtatttgaatctgattcaacttgcagcacctctggtaattccgcatcgctggat
atggctcaaggcagtgtgcccaatatgctagctgattataattcagcatctaaaaatgca
attaatagtaataagctaagcgtaggtacagacttgcgtaactacgtgatggccactgca
ggtaaaggcgctaaaacgccttggttgtcgagctacagtgaagggaaaaataatattatt
gcagcagcgcctaatagctgccaataa
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