Shewanella aestuarii: HBH39_15755
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Entry
HBH39_15755 CDS
T06921
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
saes
Shewanella aestuarii
Pathway
saes00300
Lysine biosynthesis
saes00470
D-Amino acid metabolism
saes01100
Metabolic pathways
saes01110
Biosynthesis of secondary metabolites
saes01120
Microbial metabolism in diverse environments
saes01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
saes00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HBH39_15755 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HBH39_15755 (dapF)
Enzymes [BR:
saes01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
HBH39_15755 (dapF)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
DHODB_Fe-S_bind
Motif
Other DBs
NCBI-ProteinID:
QIR15760
UniProt:
A0A6G9QME2
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All DBs
Position
PN3F2:complement(3609004..3609831)
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AA seq
275 aa
AA seq
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MIQFTKMHGLGNDFMVVDGVTQNVFFSPDQIRRLADRNFGIGFDQLLLVEPPYNPDLDFH
YRIFNADGTEVEQCGNGARCFARFVRNKGLTNKNKIRVSTSSGKITLRVERDGNVTVNMG
VPITEPSQIPFKAKKSEKTYLLQTPIQTFLCGAISMGNPHCVLEVEDVDFAAVEEIGSML
TNHERFPKGVNVGFMQVVSSSHIKLRVYERGAAETLACGTGACAAAAVGQLQNKLEKQVR
VDLPGGTLIINWEGEGKPLWMTGPAEHVYDGQIQL
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
ttgattcaatttacaaaaatgcatgggctaggcaacgactttatggtggttgatggcgtg
actcaaaatgtatttttttcgccggaccaaatccgtcgtttggccgaccgtaactttggt
attggttttgaccaattattgttggtggagccgccttacaatccagacttagattttcat
tatcgtatttttaatgctgacggcactgaggttgagcagtgcggcaatggcgcacgttgc
tttgctcgatttgtccgtaataaaggcttaaccaataaaaataaaatccgcgttagtacc
agttcgggcaaaattactttacgggtagagcgtgacggcaatgttacggtgaacatgggc
gtgcctattactgagccatcccaaattccgtttaaagctaaaaagagtgaaaaaacctat
ttattgcaaacgccaatacagacatttttatgcggtgcgatttctatggggaatcctcat
tgtgtgttggaagtggaagatgttgattttgcggcagttgaagagataggttcaatgttg
accaatcacgaacgtttccctaaaggggttaacgttggttttatgcaagttgtcagctca
agccacattaagctaagagtatacgagcgtggcgctgcagaaaccttagcctgtggcaca
ggcgcctgcgcagcagcagcggttggtcagttgcaaaataagcttgaaaaacaagtgcga
gtagaccttcctggtggcacattaatcattaattgggaaggcgaaggcaaaccgctatgg
atgacaggcccggcagaacatgtatatgatggtcaaattcaactgtaa
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