Shewanella aestuarii: HBH39_19470
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Entry
HBH39_19470 CDS
T06921
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
saes
Shewanella aestuarii
Brite
KEGG Orthology (KO) [BR:
saes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saes03400
]
HBH39_19470 (radA)
DNA repair and recombination proteins [BR:
saes03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HBH39_19470 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DUF7125
AAA
DnaB_C
AAA_16
Rad51
Lon_C
nSTAND3
AAA_22
PAXNEB
AAA_5
ABC_tran
NACHT
NPHP3_N
TsaE
nSTAND_NTPase5
Elong_Iki1
Zeta_toxin
AAA_14
AAA_24
AAA_19
GvpD_P-loop
TIP49
KAP_NTPase
RecA_N
AAA_30
SLFN-g3_helicase
NTPase_1
MCM
ATPase_2
AAA_29
RuvB_N
Motif
Other DBs
NCBI-ProteinID:
QIR16655
UniProt:
A0A6G9QRH9
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All DBs
Position
pPN3F2_2:complement(176430..177842)
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AA seq
470 aa
AA seq
DB search
MAKKSDSVWGCSECGATTSKWVGQCVECKNWNTVVELKIAKVLPTSNIGKNAGFSGYAGS
DNVKPLKMSEINQLQFSRASTGSSEFDRVLGGGVTLGSVVLLSGDPGSGKTSLLTSVAHE
LALAGKVLYVTGEESSSQFKQRSEERFGHDWGGEREDSFRLSTSTEVELLLAEIEQLSSN
FVFIDSIQTLFSQSISGQPGGIAQVSYCAKTINAFAKKRGITIFMIAHVNKSSELAGPKL
IEHVADTILHIEVADSGNVRTARASKNRFGDTDEIGLFVMQERGMTSISNPSKFFLVSDV
QSPGSAITMVQNGNRNLALEIQCLTSEAEGEFATRNALGISMSRLKMIIAVCRKHTGARI
NHDVYINLVGGLKIPETDTSTDLATAAALLSSLNDIIIPTTSCFIGEVSLNGSVRPVSNG
VPRVREALKIGFKNIYISKANYHANMLKDMPDGASITQIATISDLKDALI
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaaaatccgatagcgtatggggctgctcagaatgcggcgccacaacgagtaaa
tgggtcggccaatgtgtcgagtgcaaaaactggaacacggtggttgagctgaaaatcgcc
aaagtgttacccaccagcaacattggcaaaaatgcaggcttttctggctatgcaggcagt
gacaatgttaaaccacttaaaatgtcggaaataaatcaactccaattcagtcgagcatca
accggctcgtctgaatttgaccgcgtattaggcggcggtgtgacgttaggcagcgttgtg
ttgttatcaggcgatcctggtagcggtaaaacctcactcttaaccagcgttgcacacgag
ctggcattagcaggtaaggtgctgtacgtcacgggtgaggaatcatcttcccaatttaaa
caacgcagtgaagaacgctttggccacgattggggcggcgaaagagaagattcgtttcgt
ctttctacctcgacggaggtggaattactactggcagaaatcgaacagttatcttcaaac
ttcgtctttattgactcaatccaaacattatttagtcaatcaatcagtggtcagcccggc
gggatagcacaagtcagctattgcgctaaaaccattaacgctttcgcaaaaaaacgcggc
atcaccatttttatgatcgctcatgttaataaatcgtcagaattagccggtcctaaattg
atagagcatgttgccgacacaattttacatatcgaagtggccgattcaggtaatgtcaga
accgctcgggcgtccaaaaatcgctttggtgacacggacgaaatcggtctattcgttatg
caagaaagaggcatgacttctatctcaaatccctcaaaattcttccttgtctcggatgtc
cagtcacctggtagtgcgatcactatggtccaaaacggtaacagaaaccttgcactcgaa
atacagtgcctaacgtctgaagccgaaggggaatttgctacaagaaatgcacttggcata
agcatgagccgcttgaagatgatcatcgctgtctgtcgcaaacatactggcgcaagaatt
aatcacgatgtctatatcaaccttgtgggcggtttaaaaataccagaaaccgacacctca
actgacttggccaccgcagcggcgttactgtctagccttaacgacatcattattccaaca
acatcgtgcttcatcggtgaggtatcacttaatggctcagtgcgccctgtatcaaacggc
gtcccgcgagtgcgcgaggcattgaaaattggctttaaaaatatctacatttccaaagcg
aactatcacgccaatatgctcaaagatatgccagatggtgccagcatcacccaaatcgcg
acaatttccgatctaaaggatgctttaatttga
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