Sulfurihydrogenibium azorense: SULAZ_0041
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Entry
SULAZ_0041 CDS
T00876
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
saf
Sulfurihydrogenibium azorense
Pathway
saf03030
DNA replication
saf03430
Mismatch repair
saf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
saf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SULAZ_0041
03430 Mismatch repair
SULAZ_0041
03440 Homologous recombination
SULAZ_0041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
saf03032
]
SULAZ_0041
03400 DNA repair and recombination proteins [BR:
saf03400
]
SULAZ_0041
Enzymes [BR:
saf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SULAZ_0041
DNA replication proteins [BR:
saf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SULAZ_0041
DNA repair and recombination proteins [BR:
saf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SULAZ_0041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
DUF4508
DUF7084
Motif
Other DBs
NCBI-ProteinID:
ACN98642
UniProt:
C1DXC6
LinkDB
All DBs
Position
complement(37174..40692)
Genome browser
AA seq
1172 aa
AA seq
DB search
MGKDFVHLHLHTHYSLLDGAIKIKDLAKKAVEYGYKAVGLTDHGNIFGAVEFYQEMKSVG
VKPIIGMESYFTNNRFEKKGEGSDDILTDKNYHLILFAKDKTGFKNLMKLSSLSYTEGFY
YKPRIDWELLEKYHEGLICQTACLKGFIPNLLSKGQYEEAKKYAKRLKDIFGEDLYFEIQ
VNGLEEQEEANKGIIKLAKELGIKVVGTNDSHYLNPEDQPAHDVIKALQMKETLQSLQEK
GKAFKVKGLHFTSPEEMYEKFKGYEEYLKNTMEIAEKCNVEIDTAETRGYLFPKYQIPGI
ENPTQEDIKAYFEKLSKEGLEKRLEKEKNLSKEKLQEYRERLQYEIDVINNMGFAEYFLI
VQDFINYAKNNGIPVGPGRGSAGGSLVAYCLGITEIDPLKHGLIFERFLNPERISMPDID
VDFCMENREKVIRYVKDKYGEDSVAQIITFNFMKSKMVIRDVARVLGFPYQEADKIAKMI
LPGPIQGSTLTIDENLEANPDFRKLYETDPKVKQLLDLARKLEGSARHTGIHAAGIVIAP
GPLDEYVPVYRDKDGNKATQFEMKTLEQLGLVKMDFLGLKTLTELDLMKKLIKERHGIEI
NYQDLPLDDENVYKLLQSGKTTGVFQLESKGMQDLLVRLKPTVFDEIIAILALFRPGPLM
SGMVDEYIERKHGRKPIEYPFEEVKEVLKETYGLIVYQEQIMFMSNILSGFSMAEADTLR
KAIGKKNPETMAKMKGRFVEGAVERGFDREKVEKLWDDIEKFASYSFNKSHSTAYAYLTY
WTAWVKTYYTDEFFAVKLSTEVNDSKFLNLLIDMENFGIKLLPPDVNKSMAEFYIESPKN
IRFGLARIKNVGESSAKEIVKEREKNGEFVDIFDFCERLDTKTANKRVLESLIKAGAFDF
EKVDRAILLNNVDKAISSGQKARESKMAGQNSLFALTTTPVVNVKHTYEDTGIKKLTERE
KLKYEKEVLGFYLSGHPINAYKKELKGKVAKIGEIYDLVFSGKRPEGDLKVKFAGVVDEI
KLKKTKSGNTMMMFSFSDETGQIDCRAFPEKLENKDLLKDDNIVVLEGFIEIDDEQEKIS
MNVVNVEPIENFLKDIKGVKIKIPKEKAMNGLLPKLQQLFKEHRGDKDVVIHIYDRNFEC
EIQLHSDFCVNLEDEFKHKLLQYVAERDVMYF
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaagattttgtacatcttcatcttcatactcactactctcttttggatggtgct
attaagataaaagatttggcaaaaaaagctgttgagtatggatataaagctgtaggtctt
acagaccatggaaatatatttggagctgtagagttttaccaagagatgaaaagtgtaggg
gttaagcctattattggtatggagagctactttacaaacaacaggtttgaaaagaaaggg
gaagggtctgacgatatacttacagataaaaactaccaccttatactttttgcaaaagat
aaaacaggatttaaaaatcttatgaagttgtcttctttatcttacacagaaggtttttac
tataaaccaagaatagactgggagctccttgaaaagtaccatgaagggcttatctgtcaa
acagcttgtttaaagggatttattccaaatcttttgtctaaaggccagtacgaagaagca
aaaaagtatgctaaaagactaaaagatatctttggagaagacctttactttgagattcag
gtaaatggcttagaagagcaagaagaggccaacaaaggtattataaaacttgcaaaagag
ttaggtattaaggtagtagggacaaatgactcccactatttaaaccccgaagaccaacca
gcccacgacgttataaaagcattacagatgaaagaaactctacaaagccttcaagagaaa
ggaaaagcctttaaagtaaaaggtcttcactttacatctccagaagagatgtacgaaaag
tttaaaggttatgaagagtaccttaaaaacactatggaaatagctgagaagtgtaatgtt
gaaatagatacagcggaaacaaggggttatctctttccaaaataccaaatcccgggtata
gaaaatccaacccaagaagatataaaagcatactttgaaaaattatcaaaagaaggatta
gaaaaaagacttgaaaaggagaaaaacctatctaaagagaagctccaagagtatagagaa
aggctacagtatgagatagacgttataaacaatatgggatttgcagagtatttccttata
gttcaggactttattaactatgcgaagaataacggtattcctgtaggtcctggaagaggt
tctgcaggaggttctttggtagcttactgtctgggtataacagaaattgacccgttaaaa
cacggtcttatctttgaaagatttttaaatcctgaaaggatatcaatgcctgatatagat
gttgacttttgtatggaaaacagggagaaggtgattcgatatgttaaagataagtacgga
gaagacagcgtagcccagattataacctttaactttatgaaatctaaaatggttataagg
gacgttgcaagggtcttaggttttccataccaagaagctgataaaatagcgaagatgata
cttcccggtccaattcaaggtagtaccttaacgatagacgaaaatcttgaagcaaaccca
gactttagaaaactctacgaaacagaccctaaagtaaaacagcttttagaccttgcaagg
aagttagaaggctctgcaagacacacaggtatccatgcagctggaatagttattgcaccg
ggtccactggatgagtacgttccagtctatagagataaagatggaaacaaagcaacccag
tttgagatgaaaaccttagaacagcttggcttagtaaaaatggacttcttaggtctaaag
acccttacagagttagacctaatgaaaaaacttataaaagaaagacatggtatagagata
aactaccaagacttaccccttgacgatgaaaacgtttacaaactgcttcaatcaggaaaa
acaacaggtgtatttcagcttgaaagtaaaggaatgcaagacctgttagtaagactcaaa
cctactgtttttgatgagataatagctatacttgcactgtttagacctggacctttaatg
agtggaatggtagatgagtacatagaaagaaaacacggaagaaaacctatagagtaccca
tttgaagaagtaaaagaagttttaaaagaaacctatggacttatagtttaccaagagcaa
ataatgtttatgtctaacatactctctggattttcaatggcagaagctgacacattaaga
aaagctataggaaagaaaaatccagaaactatggcaaaaatgaaaggaagattcgttgaa
ggtgcagtagaaaggggatttgacagagaaaaagtagaaaaactttgggacgatatagaa
aagtttgcttcatactctttcaacaaatcccactctacagcatacgcatacctaacctac
tggactgcttgggttaaaacttactacacagatgaattttttgcagtaaaactctctaca
gaggtaaacgatagtaaatttttaaacctccttatagatatggaaaactttggtataaaa
ctactaccccctgatgtaaacaaaagtatggctgagttttacatagaatctccaaaaaac
ataagatttggacttgcaaggataaagaacgtaggagagtcttcagcaaaagaaatagtt
aaagagagagaaaaaaatggagaatttgttgatatttttgatttttgcgaaagacttgac
acaaaaacggcaaacaaaagagtattagaaagtcttataaaagcaggagcttttgacttt
gagaaggtagacagagccatcttactaaacaacgtggataaagcaatatcttcaggacaa
aaagcaagggagagtaaaatggccggacaaaactctcttttcgctttaacaacaactccc
gttgtaaacgtaaaacatacttacgaagatacaggaattaagaaacttacagaaagagaa
aagttaaagtatgaaaaagaagtcttaggattttacctttcaggacatccaataaatgct
tacaaaaaagagctaaaaggaaaagtagcaaaaataggagaaatatacgaccttgtcttt
agtggaaaaagaccagaaggtgatttaaaagtaaagtttgcaggcgttgtagatgaaatc
aagctaaaaaagaccaagtcaggaaatacgatgatgatgttcagcttttctgatgaaaca
gggcagatagattgtagagcctttccagaaaaacttgaaaacaaagaccttttaaaagat
gacaacatagttgtgttagaaggttttatagaaatagatgacgaacaggagaagatatca
atgaatgtagtaaatgtagagcctatagaaaactttttaaaagatataaaaggtgtaaaa
ataaaaataccaaaagaaaaagctatgaatggcttacttccgaaattacaacagctcttt
aaagagcacagaggagacaaagatgttgtaatacatatttacgacagaaactttgagtgt
gaaatacagcttcactctgatttttgtgtaaacttagaagatgagtttaaacataagcta
cttcagtatgtagctgaaagagatgtaatgtatttttaa
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