Sulfurihydrogenibium azorense: SULAZ_1461
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Entry
SULAZ_1461 CDS
T00876
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
saf
Sulfurihydrogenibium azorense
Pathway
saf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
saf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SULAZ_1461
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
saf03019
]
SULAZ_1461
03009 Ribosome biogenesis [BR:
saf03009
]
SULAZ_1461
Enzymes [BR:
saf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SULAZ_1461
Messenger RNA biogenesis [BR:
saf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SULAZ_1461
Ribosome biogenesis [BR:
saf03009
]
Prokaryotic type
rRNA helicases
SULAZ_1461
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Utp25_C
Cas3-like_C_2
P-loop_SecA
ERCC3_RAD25_C
Helicase_C_2
ADH_zinc_N
Peripla_BP_4
HEM4
HTH_CLF_N
Flavi_DEAD
AAA_30
AAA_22
DUF1904
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-ProteinID:
ACN99115
UniProt:
C1DWE1
LinkDB
All DBs
Position
complement(1368691..1369884)
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AA seq
397 aa
AA seq
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MSNKTFKDLGISQETLKSLEDLGYSKPTEIQEKAIPAVLSGKDLVAQAQTGTGKTAAFGI
PIVESVNTKQKKIQALVLVPTRELAIQVAKEIKDLGKNKKVFVLSVYGGKSMKHQIDFLK
KGNDVVIVGTPGRVKDLLERGFLKLDNVKMFVLDEADRMLEMGFIEDIEDIMSYLPEDRQ
NLLFSATMPKEILELAQEFLNEDYQTIKVKPDEITVEKIKQIIYRVDPKNKFNKLIEVLS
QNQAEKTIIFTQTKLEADQLSEDLSKEGFSVSAIHGDFSQKKRETVLHNFRTGKLKILVA
TDVAARGLDIKGVELVINYGLPKNAESYVHRIGRTGRAGKEGTAISIPTPSEDKYLQQIL
QKTKANIEVINEASEKKFTKKETKKSSFNSRRISSRR
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacaaaacattcaaagatttaggtatttctcaagagactttaaagtctttggaa
gatcttggttattcaaaaccaacagagattcaagagaaggcaattccagcagttttaagc
ggtaaagacttagtggctcaagcccaaacaggaacaggtaaaacagcagcttttggtatt
ccaatagttgaaagtgttaatactaaacagaaaaaaatccaagctttagttttagttcca
acaagagagctggcaattcaagttgcaaaagagattaaagatttagggaaaaacaaaaaa
gtttttgttttatcagtttacggtggaaaatctatgaaacatcaaatagatttccttaaa
aagggtaatgatgttgtaatagtaggaacaccaggaagagttaaagatttattagaaaga
ggatttttaaagttagataatgtaaagatgtttgttttagatgaagcagatagaatgctt
gaaatggggtttatagaggatatagaagatataatgtcttaccttccagaagatagacaa
aatttacttttctcagcgactatgccaaaagaaattttagagttggctcaagagttttta
aacgaagattatcaaacaataaaagttaaaccagatgagataacggtagaaaagataaaa
cagattatctacagagtagaccctaaaaataagtttaacaaacttatagaagttttatct
caaaaccaagcagaaaaaactataatatttactcaaacaaagttagaagctgaccagcta
tcagaagacttgtccaaagaaggatttagcgtaagcgcaattcacggagatttttctcaa
aagaaaagagaaacagtcctgcataactttagaactggaaagttaaaaatattggttgca
actgacgttgctgcaagagggcttgatattaaaggtgttgagctagttataaactacggt
cttccaaaaaatgcagaaagttatgtacatagaataggtagaactggaagagccggaaaa
gaaggaacagcaatatctataccaacaccatcagaagataagtatttacaacaaatatta
cagaaaacaaaagcaaacatagaagttattaacgaagcttctgaaaaaaagtttacaaaa
aaagaaactaaaaaatcatctttcaactctagaagaatctcatcaagaagataa
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