Sulfurihydrogenibium azorense: SULAZ_1762
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Entry
SULAZ_1762 CDS
T00876
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
saf
Sulfurihydrogenibium azorense
Pathway
saf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
saf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SULAZ_1762 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
saf03021
]
SULAZ_1762 (rpoC)
03400 DNA repair and recombination proteins [BR:
saf03400
]
SULAZ_1762 (rpoC)
Enzymes [BR:
saf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SULAZ_1762 (rpoC)
Transcription machinery [BR:
saf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SULAZ_1762 (rpoC)
DNA repair and recombination proteins [BR:
saf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SULAZ_1762 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
BSH_YknX
NusG_add
SMC_ScpB
Importin_rep_5
Motif
Other DBs
NCBI-ProteinID:
ACN98904
UniProt:
C1DX82
LinkDB
All DBs
Position
complement(1627501..1632243)
Genome browser
AA seq
1580 aa
AA seq
DB search
MENKERKNFQRFDAIRLSLASPEIIRSWSHGEVKKPETLNYRTLKPEKDGLFDARIFGPI
KDYECLCGKYKKKKYEGTICDRCGVEVTRSDVRRERFGHIELASPVVHIWYLKSTPSKIG
SLLDLTSRDIERVVYFESYLLIEHPTEEEEEAFEKDPRTLPILEGGLTKFVKLSVISEEE
LRQREYEYSNPEKFEYGMGAEKVKDILSRIDMEVLIKKLKKELHGYAGTFDDLSLEFKLN
YPRIYSKAIAEIARKFQEVGLRFGDVEPTEKEIDAVISQGYYVVIDPGNKNYKFGQIVNK
EQNQLDESVVALTGSEALEKLYKAYREKVKEIPIFETVKEAVRNVILKEGSDARLKKLIR
RLRLAEGFLHSGNKPEWMILDVLPVIPPDLRPLIPLDGGRFATSDLNDLYRRVINRNNRL
KRLIDLDAPEIIIRNEKRMLQEAVDALIDNGRRGRIVTQNNRPLKSLSDSLRGKQGRFRQ
NLLGKRVDYSGRSVIVVGPELQMHECGLPKQMALELFKPFIYRRLEEKGYATSIKSAKRL
VEEKAPEVYECLEEVVKQHPVLLNRAPTLHRMSVQAFEPKLVEGKAIKLHPLVCPPFNAD
FDGDQMAVHVPLSVEAQLESYILMLSTQNILSPAHGKPVTMPSQDIILGIHYMTQELPGA
VGEGKVFASEEEAKIAYELGKVDLLAKIKVRKEGKTVETTVGRLLFNKILPKGFRFVNEV
LDKKKISKLISEIYEKYGNEIAAQTLDKIKEIGFKFATKAGVSIAVSDLVVPKEKEKILK
KAIKEAEVVWNQYVDGIITKGERHNKVIDIWSNTTNEVASKMFEEIEKTERVENGKKYPG
YFNPVYMMASSGARGSRDQIRQLAGMRGLMAKHSGEFIETPIMSNFREGLSVVEYFISTY
GARKGLADTALKTAVAGYLTRRLADVAQDVIITAEDCGTLKGITVGAIIESGEIVAPFKD
RIVGRYAAEDVFDPYTGELLLSAGEEITEEIADKFEKAGIEKVKIRSALTCEMDHGVCAK
CYGRDLSQKKLVDVGEAVGIIAAQSIGEPGTQLTMRTFHIGGAATAKAAQTQHVSTESGI
VKLQNVKYVVDKKGRKLIINREGSIKIVNEEGKTLERFPAPYGAVLYVEDGQKVNSGTVL
AEWEPFSDPIVIEKGGEVEFRDVILDVTLKEERDNITGKTSYVITFLRPKDAQLHTPRMI
VKDDEGKEYVYDLPVNTILLIPKENLEEVWDKCFSCSEAEKTDVFHKYIQVKKGFRVSEG
DIIAKIPKEKAKVRDIVGGLPRVEELLEAREPKNKAIISEIDGIVRIYEDAKEITIINPK
EQKTQTYKVPENTFVIVKNGSLVKAGQSLVDDGSIKAEFDGMVRLKSEGSRIVVFNKETG
QQRDYKVPKGKFIIVKDNAIVRAGDSLTDGSPNPHDILRVMGVEELAAFLVKEAQIVYRL
QGVEINDKHFEVIIRQILKKVKIVDPGDGRFLLNEIVDKEDLEEEIRKVIEEGGRPPKAE
PVLVGITKASLTTRSWISAASFQETTRVLADAAVEGKVDPLKGLKENVIIGGLIPAGTGI
EEYAEVEVALEEKESVIEEN
NT seq
4743 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaataaagaaagaaaaaattttcaaagatttgatgcaataagattatctcttgcc
tctccagagataattagatcttggtcacatggcgaagttaaaaaacctgaaacccttaac
tatagaacgctaaagcctgaaaaagacggactttttgatgcaagaatatttggtccgata
aaagattacgaatgtttatgtggtaaatataaaaagaagaaatacgaaggaacaatatgt
gataggtgtggtgttgaggtaacaaggtctgatgtaagaagagaaagattcggacatata
gaactggcgtctccagttgttcatatttggtatttaaaatcaaccccttcaaagataggt
agccttttagaccttacatcaagggatattgagagggttgtttactttgaatcataccta
cttatagagcatcctactgaggaagaagaagaagcttttgaaaaagacccaagaacccta
ccaatactagagggaggacttacaaagtttgttaaactttcagtaatatcagaagaagag
ttaagacagagagaatacgagtactcaaacccagaaaagtttgagtacggtatgggagct
gaaaaagtaaaggatattctctcccgtatagatatggaagtgctcattaaaaaattgaaa
aaagagttacacggttatgcaggaacatttgatgaccttagtcttgaatttaaacttaac
tacccaagaatttatagtaaagcaatagctgaaattgcaagaaaattccaagaagtcggt
ttacgttttggagatgtagaaccaacagagaaagaaatagatgccgtaatttctcaaggg
tactatgtggttatagatccaggaaataaaaactataaatttggacagatagttaataaa
gaacaaaatcaacttgatgagtccgttgttgctttaacaggatctgaagctttagaaaaa
ctttacaaagcttatagggaaaaggtaaaagaaatacctatatttgagactgtaaaagaa
gcagtaagaaacgttatccttaaagaaggaagtgatgcgagactaaaaaaacttattaga
agattaagattagcagaaggatttttacattctggaaataaacctgaatggatgatctta
gatgttcttcctgtaattcctccagatttaagacctcttatacctttagatggaggtaga
tttgcaacatcagatcttaatgatctatacagaagggttataaatagaaacaatagatta
aaaagacttatagatcttgatgctccagagataattattagaaatgaaaaaaggatgcta
caagaggctgttgatgcccttatagacaatggtagaagaggaagaattgtaactcaaaat
aacagacctcttaaatctctttctgactctttaagaggaaagcaaggtagattcagacag
aaccttttaggtaagagagttgattactctggtcgttctgttattgttgtaggaccagag
cttcaaatgcatgaatgtggtcttccaaaacagatggcacttgaactgtttaaaccgttt
atatacagaagacttgaagaaaaaggatacgcaacttctataaaaagtgcaaaaagactt
gttgaagaaaaagctccagaagtgtatgaatgcttagaagaagtagtaaaacaacatcca
gtacttttaaaccgtgctccaactcttcatagaatgtcagttcaagcatttgagccaaag
cttgtagaagggaaggctataaaactccatccactagtttgtcctccatttaacgcagac
tttgacggagaccaaatggctgttcacgtacctctctctgtagaggctcaacttgagtct
tacattcttatgttatcaacccaaaacattctctctcctgcccacggtaaaccggttaca
atgccttctcaagatataattcttggtatccactatatgactcaagagttgcctggagct
gttggagaaggaaaagtatttgcaagtgaggaagaggctaaaattgcttatgaacttgga
aaagtagacctgcttgctaaaataaaagttaggaaagaaggtaagactgtagaaacaact
gtaggaagacttttattcaacaaaattcttccaaaaggctttagatttgtaaatgaagtt
ttagataagaaaaaaatatctaaactcatatctgagatatatgaaaaatacggaaacgaa
atagctgctcaaacgttagataaaattaaagaaataggatttaaatttgcaaccaaagct
ggagtatctatagctgtttctgaccttgttgttcctaaagagaaagaaaagatcttgaaa
aaagctataaaagaagctgaggttgtatggaaccagtacgtagatggaataataacaaaa
ggtgaaagacacaacaaagttatagatatatggtctaacacaacaaacgaagttgcctct
aagatgtttgaagagatagaaaaaactgaaagagtagaaaatggtaaaaaatacccaggt
tattttaaccctgtttatatgatggcatcatcaggtgcaagaggtagtagagaccagata
agacagctggctggaatgcgtggacttatggcaaaacactctggagagtttatagaaact
ccaattatgtcaaactttagagaaggactgtctgtagtagagtattttatttctacctac
ggtgcaagaaaaggattagcagatacagcgttaaaaacagctgtagctggatatttaacg
agaagacttgccgatgttgctcaagatgtaattataacagcagaagactgtggtacttta
aaaggaattacagtaggtgcaataatagaaagtggagaaattgtagcaccatttaaagat
aggattgtaggaagatacgcagcggaagatgttttcgatccttacacaggagagctttta
ctctctgctggagaagagataacagaagagattgcagataagtttgaaaaagcaggaata
gaaaaagttaaaatcaggtctgctttaacctgtgagatggatcacggcgtttgtgcgaag
tgttatggaagagatctatcacagaaaaaattagttgatgtaggtgaagctgtaggtata
attgcagctcaatctataggtgaaccgggtacacagcttactatgagaactttccatata
ggtggtgcagctacagcgaaagcagcacaaacacaacatgtatcaacagaatcaggaatt
gtaaaacttcagaatgttaaatatgttgtagataaaaaaggaagaaagcttatcattaac
agggaaggttctataaaaattgttaatgaagaaggaaaaactttagaaagattccctgcc
ccttacggagctgttttatacgtagaagatggacaaaaggtaaattcaggaacagttctt
gcagaatgggaaccattcagcgatcctatagtaattgaaaaaggtggagaagtagagttt
agagacgttatattagatgtaactctcaaagaagaaagagataatattacaggaaaaaca
agttatgtaattacgttcttaagaccaaaagatgcacagctccacactccaagaatgatt
gttaaagatgatgaaggtaaagagtatgtatacgatttaccagttaacactatactctta
atacctaaagagaatcttgaagaagtttgggataaatgtttctcatgttcagaagctgaa
aaaactgatgtattccataagtatatacaagttaaaaaaggctttagagtaagtgaaggt
gacattattgcaaaaattccaaaagagaaggcaaaagttagagatatagttggtggttta
ccaagagttgaagaacttcttgaagcaagagaacctaagaataaagctattatttcagag
atagacggcatagtaagaatatacgaagacgctaaagaaattacgataataaatccaaaa
gaacagaagacacaaacttacaaagtaccagaaaacacatttgttattgtaaaaaatggt
agtttagtaaaagcaggacaaagtttagtagatgatggttctataaaagctgaatttgat
ggaatggtaagattgaaaagtgaaggctcacgtatcgttgtatttaacaaggaaactgga
caacaaagagactacaaggtaccaaaaggtaaattcataatagtaaaagataatgctata
gtaagagcaggagattctttaaccgatggatctccaaaccctcacgatattttaagagta
atgggtgtagaagagttagcagcattccttgtaaaagaagcacaaatagtctatagatta
caaggtgtagagataaacgacaaacactttgaagtaatcatcagacaaatacttaagaaa
gttaaaattgtagaccctggagatggtagatttttattaaatgagatagttgacaaagaa
gatttagaagaagaaattagaaaagttatagaggaaggtggaagacctccaaaagcagaa
cctgttttagttggtattactaaagcatcattaacaacaagaagttggatatctgcagca
tctttccaagaaacaacaagagtacttgcagatgctgctgttgaaggaaaagtggatcca
ttaaaaggattaaaagagaacgtaattataggtggattgatacctgccggaacaggaata
gaggagtatgctgaagtagaagtagctttagaagagaaagaatcggtaatagaagaaaat
taa
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integrated database retrieval system
