Simiduia agarivorans: M5M_00195
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Entry
M5M_00195 CDS
T02281
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase iron-sulfur subunit
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
saga
Simiduia agarivorans
Pathway
saga00020
Citrate cycle (TCA cycle)
saga00190
Oxidative phosphorylation
saga00650
Butanoate metabolism
saga00720
Other carbon fixation pathways
saga01100
Metabolic pathways
saga01110
Biosynthesis of secondary metabolites
saga01120
Microbial metabolism in diverse environments
saga01200
Carbon metabolism
Module
saga_M00009
Citrate cycle (TCA cycle, Krebs cycle)
saga_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
saga_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
saga00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
M5M_00195 (sdhB)
00650 Butanoate metabolism
M5M_00195 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
M5M_00195 (sdhB)
00720 Other carbon fixation pathways
M5M_00195 (sdhB)
Enzymes [BR:
saga01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
M5M_00195 (sdhB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_17
Fer4_8
Fer4_10
Fer4_7
Fer4_9
Fer4_16
Fer4
Motif
Other DBs
NCBI-ProteinID:
AFU97276
UniProt:
K4KED8
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All DBs
Position
complement(44758..45462)
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AA seq
234 aa
AA seq
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MLKVEIYRYNPESDKAPHMQTYEVDTQGKDLMVLDVLELIKAQDPSLAYRRSCREGVCGS
DGMNINGKNGLACIKPLSECVVNNKLVLRPLPGLPVIRDLVIDMTQFYDQYKKVQPYLQN
STPAPAIERLQTPEDREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLQAYRFLAD
SRDNATEERLAKLDDPFSVFRCHGIQNCVAVCPKGLNPTRAIGHIRNMLLQRAV
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaagttgaaatttatcgctacaaccctgagtccgacaaagcccctcatatgcaa
acctatgaggtggatactcagggcaaagacctgatggtgctggacgtgctggagctgatc
aaagcccaggaccccagcctggcttatcgtcgctcctgccgtgaaggcgtgtgcggttcc
gatggcatgaacatcaacggcaagaacggcctggcctgcatcaagcctttgtccgagtgt
gttgtaaataacaaattggttctgcgcccgctgcccggcctgccggtgatccgcgatctg
gtgatcgacatgacccagttctatgatcagtacaaaaaggtccagccctacttgcagaac
agcacccctgcgcccgccatcgagcggctgcagaccccggaagaccgcgaaaagctggac
gggctgtacgagtgtattctgtgcgcctgttgctctaccagctgcccgtccttctggtgg
aatcccgacaagttcatcggcccggccggtttgttacaagcctaccgctttctggcggac
agccgcgacaacgccaccgaagaacgtctggccaaactggatgatcccttcagcgtattc
cgctgccatggcatccaaaactgtgtggcggtttgcccgaagggtctgaaccccacgcgc
gccattggccacattcgcaatatgttgttacaacgggcggtataa
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