Simiduia agarivorans: M5M_00590
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Entry
M5M_00590 CDS
T02281
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
saga
Simiduia agarivorans
Brite
KEGG Orthology (KO) [BR:
saga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
saga03016
]
M5M_00590
Enzymes [BR:
saga01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
M5M_00590
Transfer RNA biogenesis [BR:
saga03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
M5M_00590
Prokaryotic type
M5M_00590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
FCD
Motif
Other DBs
NCBI-ProteinID:
AFU97353
UniProt:
K4KHC7
LinkDB
All DBs
Position
131088..131972
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AA seq
294 aa
AA seq
DB search
MQADQKIYTPNGEILPGMALPEGVRRVALALEYHGGSFRGFQQQEEGVPTVQAALQQALS
KVANEPITLVCAGRTDACVHATHQVVHFDTRALRQPKAWTQGVNAHLPAGVAIKWAGEVP
GEFHARFSARERTYRYVIYNSPTRPALMHDQLTWCREPLDLARMQAGAAHLIGEHDFNAF
RAAQCQARHPVREIKRIDLARRGDLLVMEITANAFLHHMVRNIAGVLMRVGKGWAEPGWV
AEVLASRDRTRAAETAPPYGLYLVHVAYPDTFSLPVFAPGPSFFPEGLGEFGHK
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
gtgcaggctgatcagaaaatatacacgcccaacggtgagattctgcccgggatggccttg
ccggaaggggtgcgccgcgtggccctggcgctggagtatcacggtggcagcttccggggt
tttcagcagcaggaggagggtgtgcccacggtgcaggcagcgctgcagcaggcgttgtcg
aaagtggccaatgagcccattaccctggtgtgtgccgggcgcacggatgcctgtgtacac
gccacgcatcaagtggtgcatttcgatacccgcgcactgcggcagcccaaggcctggact
cagggggtcaacgcccatctgccagccggggtcgcgatcaaatgggctggcgaagtgccg
ggggaattccacgcgcgcttcagtgcccgcgagcgcacctaccgttatgttatttacaat
tcgcccacgcgaccggcgctgatgcacgatcagttaacctggtgccgcgagccattggat
ctggcgcggatgcaggccggtgccgcccacctgatcggcgagcacgatttcaatgcgttt
cgcgcggcccagtgtcaggcacgccatccggtacgggaaatcaagcgtatagacctggcg
cgacgcggcgatttactcgtgatggagatcaccgccaatgccttcctgcatcacatggtg
agaaatatcgcgggcgtgttaatgcgggtgggcaaaggttgggccgaacccggttgggtg
gccgaagtactggcgtccagagaccggacccgggcggcagaaacggcgccgccctatgga
ttgtacctggtgcatgtggcctacccggacactttcagcttgccggtttttgcgcctggc
ccgagtttcttccccgaaggtctcggagaattcgggcacaagtga
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