Simiduia agarivorans: M5M_01685
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Entry
M5M_01685 CDS
T02281
Symbol
fadB
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
saga
Simiduia agarivorans
Pathway
saga00071
Fatty acid degradation
saga00280
Valine, leucine and isoleucine degradation
saga00310
Lysine degradation
saga00362
Benzoate degradation
saga00380
Tryptophan metabolism
saga00410
beta-Alanine metabolism
saga00640
Propanoate metabolism
saga00650
Butanoate metabolism
saga00907
Pinene, camphor and geraniol degradation
saga00930
Caprolactam degradation
saga01100
Metabolic pathways
saga01110
Biosynthesis of secondary metabolites
saga01120
Microbial metabolism in diverse environments
saga01200
Carbon metabolism
saga01212
Fatty acid metabolism
Module
saga_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
saga00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
M5M_01685 (fadB)
00650 Butanoate metabolism
M5M_01685 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
M5M_01685 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
M5M_01685 (fadB)
00310 Lysine degradation
M5M_01685 (fadB)
00380 Tryptophan metabolism
M5M_01685 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
M5M_01685 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
M5M_01685 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
M5M_01685 (fadB)
00930 Caprolactam degradation
M5M_01685 (fadB)
Enzymes [BR:
saga01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
M5M_01685 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
M5M_01685 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
M5M_01685 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
M5M_01685 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Pel9A-like_beta_helix
Motif
Other DBs
NCBI-ProteinID:
AFU97562
UniProt:
K4KUB9
LinkDB
All DBs
Position
366678..368828
Genome browser
AA seq
716 aa
AA seq
DB search
MVYQGKSVSVQMLDDGIAELCFNASAESVNKFDVATVNELSEAITALEQCEGLKGVIATS
VKGVFIVGADITEFGGVFGAGEDAVIGHLAKNNENNNRLEDLKVPVVVAINGYALGGGLE
FCLACDYRIMASGAKIGLPETKLGLIPGWGGTVRLPRIAGVDTAAEWIASGKEQRADAAL
KAGVVDAVVEADQVRDAALHTLAQCISGAFDYQARRAQKTGPMALNDTEGLMAFETAKAF
VGAQAGKNYPAPVTAIKCMQKAMKLDRTGALAAEAAGFAKLAATTAAQSLVGLFLSDQLI
GKKAKGWEKQADKRIERAAVLGAGIMGGGIAYQSALKGTPIKMKDIAQAGIDLGLSEASK
LLTKQVERGRMKPAQMAEVLTRIEPCLAYDGFDQVDIVVEAVVENPKVKHAVLADVETRV
GEDAIIASNTSTISISYLAQALKRPENFCGMHFFNPVHAMPLVEVIRGEKTSDKAVARTV
AYANAMGKKAVVVKDCPGFLVNRVLFPYFAGFSMLLRDGADFQQVDKVMQAWGWPMGPAY
LLDVVGIDTAAHCEQVMAEGFPTRMGKTFKACTDIMYEAKRFGQKNAKGFYQYQPDKKGK
PAKLVDDETYALLAPHVAERKDFSEQEIVARMMIPMLTEMARCLEEGIVDSAAEADMALI
YGLGFPPFRGGVFRWADSLGLTAVVEMAKAYETLGELYQPTEGMLALAGAGKSYYA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggtctaccagggcaaatcggtatctgtgcaaatgcttgacgacggtatcgcggagctg
tgttttaacgcttccgccgagtcggttaacaaatttgacgtggctacggtcaatgagctt
tcagaagccatcaccgcgctggagcagtgcgagggccttaagggtgtgatcgcgacatcg
gtcaaaggcgtgtttatcgtgggtgccgacattaccgagtttggcggtgtgtttggtgcc
ggcgaggatgccgtgattggccatctggccaaaaataacgagaacaacaaccgcctggaa
gacctgaaggtgcccgttgtggtggcgatcaatggctatgccttgggtggtggcctggag
ttctgcctggcgtgtgattaccgcattatggcctccggtgccaagatcggcctgccggaa
acgaaattggggctgattccggggtggggtggcaccgtgcgcttgccgcgtattgccggt
gttgataccgccgccgagtggattgcatccggtaaagagcagcgtgccgatgccgcgctc
aaagccggcgtggtggatgccgtggtggaagccgatcaggttcgcgacgccgcgctgcac
acactggcgcaatgcatcagtggcgcattcgactatcaggcccgtcgcgcgcagaaaacc
ggccccatggcactgaacgataccgaaggtctgatggcctttgaaaccgccaaagctttt
gtgggcgcgcaagcgggaaaaaactacccggcgccggttacggcgatcaagtgcatgcag
aaagccatgaagctggaccgtaccggcgcactggcggctgaggccgcgggctttgccaaa
ctggcggccaccacggcggcgcaatccctggtggggctgtttttgtcggatcagttgatc
ggtaagaaagccaaagggtgggaaaaacaggctgataagcgtattgagcgtgcggcggta
ttgggtgcaggcatcatgggcggtggtattgcctaccagtctgcgctcaagggtacgccg
attaaaatgaaggatatcgcgcaggcgggtatcgaccttggactatcggaagcctccaaa
ctgttgaccaaacaggtagagcgcgggcgcatgaagccggctcaaatggcagaagtactg
acccgcatcgagccgtgtctggcatacgacggttttgaccaggtagacatcgtggtcgag
gcggtggtggaaaatccgaaagtcaaacacgcggtgctggccgatgtggagacgcgcgta
ggtgaggatgccattattgcgtcaaacacttccaccatttccatttcctatctggcgcag
gcactcaaacgcccggaaaatttctgtggcatgcattttttcaatccggtacacgccatg
ccgttggtggaagtgatccggggtgaaaaaacctccgataaagccgtcgcacgcacagtg
gcctacgccaatgccatgggcaagaaagcggttgtggtgaaggattgcccgggctttttg
gtgaaccgggtactgtttccctattttgccggtttctccatgttgctgcgcgacggtgcc
gacttccagcaggtagacaaggtcatgcaagcctggggatggcccatggggccggcctat
ttactcgatgtggtgggtattgatactgcggcccattgcgagcaggtgatggcggaaggt
ttccccacgcgcatgggcaagacgtttaaagcgtgtacagacatcatgtatgaagcgaaa
cgcttcgggcagaaaaatgccaaagggttttaccagtatcagcccgataaaaaaggcaag
ccggccaagttggtggatgacgaaacctacgccttgcttgcgccccatgtggcagaacgc
aaggatttttcagagcaggaaatcgttgcccggatgatgattcccatgctgacagaaatg
gcgcgctgcctggaagagggtattgtggattcggcggccgaagccgatatggcattgatt
tatggcctcggttttccgcccttccgcggcggtgttttccgttgggccgatagcctcggg
ttgacagccgttgtggaaatggcgaaggcctatgaaacgttgggcgaactgtatcagccc
acagaaggcatgctggcgttagccggcgctggcaaatcttattacgcgtga
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