Simiduia agarivorans: M5M_01730
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Entry
M5M_01730 CDS
T02281
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
saga
Simiduia agarivorans
Brite
KEGG Orthology (KO) [BR:
saga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
saga03032
]
M5M_01730
03036 Chromosome and associated proteins [BR:
saga03036
]
M5M_01730
03400 DNA repair and recombination proteins [BR:
saga03400
]
M5M_01730
DNA replication proteins [BR:
saga03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
M5M_01730
Chromosome and associated proteins [BR:
saga03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
M5M_01730
DNA repair and recombination proteins [BR:
saga03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
M5M_01730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Barstar
HU-CCDC81_euk_2
ACP_syn_III_C
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
AFU97569
UniProt:
K4KES9
LinkDB
All DBs
Position
379007..379282
Genome browser
AA seq
91 aa
AA seq
DB search
MNKSELIEAIAASADIPKAAAGRALDAMVDSITGALKQGDQVVLVGFGTFAVKDRAARTG
RNPQTGKEIQIAAAKVPGFKAGKALKDAVNG
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaatctgaattgatcgaagcgattgctgcttctgcggacatcccaaaggctgcc
gccggtcgtgcactcgatgcaatggttgactcaatcactggtgcgctgaagcaaggtgat
caggttgttttggtaggttttggtaccttcgcagtgaaagatcgtgcagcgcgcactggt
cgcaatccgcaaaccggtaaggaaattcagattgctgctgctaaagttccaggcttcaaa
gcgggtaaggcactgaaagacgcggttaacggttga
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