Simiduia agarivorans: M5M_02000
Help
Entry
M5M_02000 CDS
T02281
Name
(GenBank) LysR family transcriptional regulator
KO
K21699
LysR family transcriptional regulator, transcriptional activator for bauABCD operon
Organism
saga
Simiduia agarivorans
Brite
KEGG Orthology (KO) [BR:
saga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
saga03000
]
M5M_02000
Transcription factors [BR:
saga03000
]
Prokaryotic type
Helix-turn-helix
LysR family
M5M_02000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_11
HTH_24
HTH_41
HTH_5
Motif
Other DBs
NCBI-ProteinID:
AFU97619
UniProt:
K4KEY1
LinkDB
All DBs
Position
455222..456178
Genome browser
AA seq
318 aa
AA seq
DB search
MKQKALLGQLADPDIRLLRVFKVVTECGGISAAELELNIGRSTISRHIKDLEQRLGITLC
RRGRSGFGLTAEGREVYASTLRLLGSLDDFRSDVNDIQRKLTGTLTIALFDKIATNPECH
LSDALSEFHAQAPDAGIEIFVEPLNEIERGVIEGRFQCGVIPSHRPSASLSYLPLFNEQM
YLYCSKAHPILALPLIDRTAILQAAYAGLGYHSPNMEVAHATGLRRQATVYDQEAIVHLL
LSGAYIGYLPDHYAQQFETAGLLQRIDHDDFNYRCQFEAIWRLSPKPSRLSALFIECLRN
AHKKNPAFLGESAGPRPL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaaaggcgctgttggggcagttggcggacccggatatccggctcctgagggtc
ttcaaggtggtgaccgaatgtggtggaatttcggcggcggagctggagctgaatatcggc
cggtctaccatcagtcgtcatatcaaggatttagagcagcgcctcggcatcaccttgtgt
cgccgggggcgttcaggttttggcttaacggccgaagggcgcgaggtgtatgcttctaca
ttgcgtttgctgggctcgttggatgatttccgctcggatgtgaatgacatccagcgcaag
ctgaccggcaccctgaccattgccttgttcgataagatcgccaccaatcccgagtgccat
ctgtcggacgcgctgtcggaattccatgcgcaggcgcctgacgccggtatcgaaattttt
gtggaaccgttgaatgaaattgagcggggtgtgatcgaaggccgctttcagtgtggcgtg
attcccagccaccgaccatcagcgagcttgtcttatttgccgctttttaacgagcagatg
tatctctattgcagtaaagcgcacccgatactggcactgcccctcatcgatcgtacggcg
atactgcaagcggcctatgccggtttgggctatcactcgcccaatatggaggtcgcgcac
gccaccgggcttcgtcgacaggccaccgtgtatgatcaggaagccattgtgcacttgctt
ttatccggtgcctacatcggttatctgccggatcactatgcgcaacaattcgaaacggcc
ggtttactccagcgcattgatcatgacgattttaattaccgctgccaatttgaagctatc
tggcgactgtcgcccaagccttcgcgtttatcggcgctgtttatcgaatgcctgcgcaac
gcgcataaaaaaaacccggcgtttctgggggagagcgccgggccaagaccattatag
DBGET
integrated database retrieval system
