Simiduia agarivorans: M5M_02305
Help
Entry
M5M_02305 CDS
T02281
Name
(GenBank) regulatory protein
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
saga
Simiduia agarivorans
Pathway
saga02020
Two-component system
saga02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
saga00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
M5M_02305
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
M5M_02305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
saga03000
]
M5M_02305
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
saga02035
]
M5M_02305
Transcription factors [BR:
saga03000
]
Prokaryotic type
Helix-turn-helix
Other families
M5M_02305
Bacterial motility proteins [BR:
saga02035
]
Flagellar system
Flagellar assembly proteins
Others
M5M_02305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
FleQ
HTH_8
AAA_5
AAA_16
HTH_50
AAA
AAA_7
nSTAND3
AAA_22
AAA_2
bpMoxR
Myosin_head
MCM
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
AFU97680
UniProt:
K4KHP1
LinkDB
All DBs
Position
518258..519691
Genome browser
AA seq
477 aa
AA seq
DB search
MLLDPIKILVIDDNPDRRRDLKVILDFMGESALSVETSHWEQEADVEKVAHGFSAVFLGE
NAQTPNLLSRLERVHQWDQGLPVVLVAQEADLPEDTNPYLKHKIIGTLPEHPTYNQLLDI
LHRAQRFRSMLSRNARAGLRRAPHLFRSLVGSTPAMEKMREMMTRVADRDVTVLITGESG
TGKEVVARNLHYHSDRRDMPFVPVNCGAIPAELLESELFGHEKGAFTGAITARAGRFEMA
EGGTLFLDEIGDMPLNMQVKILRVLQEKCFERVGGNKSQPTNVRIIAATHRNLEDMIEQG
NFREDLYYRLNVFPIEVPALRERAEDIPALISELVSRLEVERRGTVRFNSQAIVSLSRHN
WAGNVRELANLVERMSIMYPTQVVGVQDLPPKYRHVDVVEDETIEMPEAPAGLVSLSDNP
LLPEAGIDLKEYLTNLECSLIQQALDDSNGVVARAADRLAIRRTTLVEKMRKYGLNR
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgttgcttgaccccattaaaattctggttattgatgacaacccagaccgccgacgggat
ctgaaggtcatattggactttatgggcgaatcagccctgagtgtggagaccagccattgg
gagcaggaagctgatgtggagaaggtggcgcacggcttcagtgcggtgttcctgggtgaa
aacgcacaaacccccaatttgctatcccgcttagagcgtgtgcaccagtgggaccagggt
cttccggtggttctggtcgcccaggaggcggacctgcctgaagataccaacccctatctc
aaacacaaaatcatcggcaccttgcccgagcatcccacctataaccagttgctcgatatc
ctgcacagggcccaacggttccgctccatgctgagccggaatgcccgcgcagggcttcgc
cgagcgccccatttgttccgtagtcttgtggggtccacacccgctatggaaaagatgcgc
gaaatgatgacccgcgtggcagaccgggatgtaaccgtgctgatcacgggcgaatcgggc
acgggcaaggaagtggttgcacgtaacctgcattaccattccgaccgtcgcgacatgccc
tttgtgcctgtcaattgcggcgctattccggcggaactactggaaagtgagctgttcggc
cacgagaagggtgcctttaccggggcgattactgcccgcgcggggcgatttgaaatggcg
gaaggcggtactctttttctggatgaaatcggcgacatgccgcttaacatgcaggtgaaa
attctgcgggtactgcaggaaaaatgctttgaacgggttggtggcaataaaagccagccc
accaatgtgcgcatcattgcggcgacgcatcgcaatcttgaagacatgattgaacagggg
aatttccgggaagacctctattaccggttgaatgtgttccccatagaagtacctgcactg
cgggagcgggcggaagatataccggccctgatcagcgagctggtcagccggttggaagtt
gaacgccggggcacggtgcgctttaactcccaggccatagtatcgctcagccgacataac
tgggcgggtaatgtgcgggagctggccaatctggtggagcggatgtcaatcatgtatcca
acgcaagtggtcggcgttcaggacctgccgcccaagtatcgccatgtggatgtggtagag
gatgaaacgattgaaatgcccgaggcgcctgcaggccttgtcagtctcagcgataacccc
ttgctgccagaggccggtatcgatctaaaagagtatttaacgaatctggagtgcagtctg
atacagcaggcactcgacgattccaatggcgtggtggcccgcgcagcagaccggctggca
atccgtcgcacaaccctggttgaaaaaatgcgtaaatacggtttgaaccgttaa
DBGET
integrated database retrieval system
