Simiduia agarivorans: M5M_02560
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Entry
M5M_02560 CDS
T02281
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
saga
Simiduia agarivorans
Pathway
saga03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
saga00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
M5M_02560 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
saga03011
]
M5M_02560 (rpsA)
Ribosome [BR:
saga03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
M5M_02560 (rpsA)
Bacteria
M5M_02560 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
PCB_OB
S1_2
TraK_C
Motif
Other DBs
NCBI-ProteinID:
AFU97731
UniProt:
K4KFM5
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All DBs
Position
569222..570904
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AA seq
560 aa
AA seq
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MSESFAELFEESLKSVDMIPGTIVTGVVIDIDKDWVTVHAGLKSEGVIPAEQFKNENGEL
TLSIGDEVQVALETVEDGFGETRLSREKAKRAEAWKVLEAAHNADEVVTGVINGKVKGGF
TVDVASIRAFLPGSLVDVRPVRETAHLEGKELEFKVIKLDQKRNNVVVSRRAVLEQANSA
EREELLASLQEGMAVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRIKHPSEIVAVGDE
IDVKVLKFDRERNRVSLGLKQLGEDPWAAITNRYPEGAKVKAVVTNLTDYGCFAELEEGV
EGLVHVSEMDWTNKNIHPSKVVNVGDEVEVMVLDIDEERRRISLGIKQCQENPWDAFGRQ
YAKNDKISGKIKSITDFGIFIGLDGGIDGLVHLSDISWNENGEEAVRKYKKGDELETVIL
AIDPERERISLGIKQLDQDPFSDYVATNDKGTIVTGTVKEVDAKGAVITLADDVEATLKA
SEISRDKVEDARNVLKEGESVEAKIINVDRKNRVINLSIKSKDVDDEKAAIKEHSNKSSE
SAAPATLGDLIKAQMQSQDK
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaagctttgcagaactctttgaagaaagtttgaaatccgttgatatgatcccc
ggcaccatcgtgaccggtgtggtaatcgatatcgacaaagactgggtgactgttcacgcc
ggtctgaaatccgaaggcgtgattcccgccgagcagttcaagaatgaaaacggcgagctg
accctgtctattggtgacgaggttcaggttgctctggaaaccgttgaagacggtttcggt
gagacccgtctttcccgcgagaaggccaagcgtgccgaagcctggaaagtactggaagct
gcgcataatgctgacgaagtggttaccggtgttatcaatggcaaggttaagggtggtttc
accgttgacgtggccagcatccgtgcgttcctgccaggttctctggtagacgtgcgcccc
gtacgcgaaaccgcgcacctggaaggcaaagagcttgaattcaaagtgatcaagctggac
cagaagcgcaacaacgtagttgtatcccgtcgtgccgttctggagcaggccaactcggct
gagcgtgaagaactgctggcaagcctgcaggaaggtatggccgttaagggtatcgttaag
aacctgaccgactacggtgctttcgtagacctgggcggcgtagacggcctgctgcacatt
accgatatggcctggaagcgcatcaagcacccaagcgaaatcgttgcagttggcgatgaa
atcgacgttaaagtgctgaagttcgatcgcgagcgcaaccgcgtatctctgggtctgaag
cagctgggcgaagatccatgggccgctatcaccaaccgttaccccgaaggtgccaaggtt
aaagccgtggtgaccaacctgaccgactacggctgtttcgccgagctggaagagggtgta
gaaggtctggtgcacgtatccgaaatggattggaccaacaagaacatccatccgtccaaa
gttgtaaacgtgggcgacgaagtggaagtgatggttctggacatcgacgaagagcgtcgt
cgtatttctctgggtatcaagcagtgtcaggaaaacccctgggatgcgtttggtcgccag
tacgccaagaacgacaagatctccggtaagatcaagtccatcaccgacttcggtatcttc
atcggcctggatggcggcatcgacggtctggttcacctgtccgacatttcctggaacgag
aatggcgaagaagccgttcgcaagtacaagaaaggcgacgagctggaaaccgttatcctg
gccatcgatcccgagcgcgagcgcatcagcctgggtatcaagcagctggatcaggacccc
ttcagtgactatgttgccaccaacgacaagggcaccatcgttaccggtactgtgaaagaa
gttgatgccaagggtgctgtaatcactcttgccgacgacgtagaagctactctgaaagcg
tctgaaatcagccgcgataaggtagaagatgcgcgcaacgtactgaaagaaggcgagtct
gttgaagccaagatcatcaacgtggatcgcaagaaccgcgtgatcaacctgtctatcaag
tctaaagatgtagacgacgagaaagcagcgatcaaagagcacagcaacaagtcttctgag
tctgctgctcctgcaaccctgggtgacctgatcaaggcccagatgcagagccaggacaag
taa
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