Simiduia agarivorans: M5M_03040
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Entry
M5M_03040 CDS
T02281
Name
(GenBank) exonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
saga
Simiduia agarivorans
Pathway
saga03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
saga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
M5M_03040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saga03400
]
M5M_03040
Enzymes [BR:
saga01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
M5M_03040
DNA repair and recombination proteins [BR:
saga03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
M5M_03040
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AFU97819
UniProt:
K4KFG8
LinkDB
All DBs
Position
676069..676839
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AA seq
256 aa
AA seq
DB search
MHQLEAIIARHQPDFIGLQETKCQDKDFPEEAIQALGYHVIFHGQKTHYGVALLSRQRPE
AVIKGFPTDEDDAQRRFIGAKFQFRDSPLWVYNGYFPQGENQGHPTKYPAKARFYSDLTN
LIGNSHTPSDQLVIMGDLNISPTDADIGIGDANRKRWLRDGKCSFLPEEREWLSTLLAQG
LSDSFRALNPAVDDQFSWFDYRSRGFEDTPKRGLRIDGILVTDSLLNLSESAGIDYDIRS
MDKPSDHAPVYLHLKD
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgcatcagcttgaagcaatcattgcacggcatcagccggatttcatcgggttacaagaa
accaagtgccaggacaaagacttccccgaggaagccatacaggcgttgggttatcatgtt
atttttcacgggcaaaaaacccattacggcgttgctctgctctcacgccagaggcctgaa
gcggttatcaaaggttttccaaccgatgaggatgatgcgcaacgtcgttttattggtgcg
aaattccaattccgcgatagtccattatgggtctataacggctattttccgcagggcgaa
aaccagggtcaccctaccaagtaccccgcaaaagcccgtttttatagcgatttaaccaat
ctgatcggcaatagtcataccccatcagaccaactggtgattatgggagacctcaatatt
tccccaacggatgccgacattggcattggcgatgccaaccggaagcgttggttgcgtgat
ggtaagtgcagctttttaccggaagaacgtgagtggctgtcaactttactggcgcaggga
ctgagcgatagctttcgtgcactcaatcccgctgtggatgaccagttcagttggtttgat
tatcgcagtcgtggttttgaggatacgcctaagcgagggctgcgtatcgatgggattctg
gtcaccgactctctgcttaatctcagcgaatctgcagggatagattacgatatcaggagc
atggacaaaccgtcggatcacgcccctgtatatctgcacctgaaagattaa
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