Simiduia agarivorans: M5M_03300
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Entry
M5M_03300 CDS
T02281
Symbol
rumA
Name
(GenBank) 23S rRNA m(5)U1939 methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
saga
Simiduia agarivorans
Brite
KEGG Orthology (KO) [BR:
saga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
saga03009
]
M5M_03300 (rumA)
Enzymes [BR:
saga01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
M5M_03300 (rumA)
Ribosome biogenesis [BR:
saga03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
M5M_03300 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
TRAM
Methyltransf_11
Cons_hypoth95
PCMT
Methyltransf_32
Methyltr_RsmB-F
Methyltransf_23
UPF0020
Methyltransf_15
Ubie_methyltran
RrnaAD
Methyltransf_12
TRM5-TYW2_MTfase
MTS
NodS
DREV
Motif
Other DBs
NCBI-ProteinID:
AFU97871
UniProt:
K4KFZ0
LinkDB
All DBs
Position
complement(728747..730087)
Genome browser
AA seq
446 aa
AA seq
DB search
MTRAPVSRRRKPAQKGTGFSLSSPVTIERLGHDGRGIGYCDGKITFVAGALPAETHRVWV
TETKRNYQAGKSHSLESEPSSDRVTPECAHYGVCGGCQLQHMSQAAQVNYKESLLTDQLV
RAGVDLACTHIEPLVADGEWGYRRRARLAVNHKGPVFAGFRTMAGSDLVRINHCPVLSPV
LDRVLNSLQGLMARMRSKTIGHVELTDHSGGPSCLIRLTARPNADEREAFLAFTEAKLYF
QWPGSRDIQDIDEQAADQAETLTIDSYGKSLTFSLDDFIQVNATINHHLIANAMALAEPQ
KHESWLDLFCGMGNFTFALAPYVKRVWGVEAIPEMIEKSRANAVRLGVANTEFLVADLQD
EQQLKKLPDRIDGVLLDPPRAGAKEALVRVVALNPARIVYVSCDPATFARDATYLIQQGY
RLARLQPHDMFPQTMHLETLALFVRR
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgactcgcgcgccggtatcgcgccgtcgcaagccggcccaaaaaggtacaggttttagt
ttaagctcgccggttaccatcgagcgcttggggcacgatggccggggtatcggttactgc
gatggtaaaattacttttgtcgccggcgcattgccagcggaaactcaccgggtctgggtt
accgaaaccaagcgaaattatcaggctggcaaaagtcattcccttgaaagcgagccttcc
tccgacagagtgactcctgagtgtgcgcactatggtgtgtgcggtggctgtcaattgcag
cacatgtcccaagccgcgcaggtcaattataaagaatcgcttttgaccgaccaattggtg
cgcgccggggtggatctggcttgcacccacattgagcccttggttgcggacggcgaatgg
ggctaccggcggcgggcgcgtttggctgttaatcacaaaggccccgtttttgcaggattt
cgaacaatggcgggttcggatctcgtgcggattaatcactgccccgtgctttcgcccgtg
ctggatcgggtgctcaattcgctccaaggtcttatggcacgcatgcgatcgaaaaccatt
gggcatgtggagcttactgatcacagcggcggtccttcctgtctgatccgattaacggcc
agacccaacgctgacgaaagggaagcttttcttgccttcactgaagccaagctatatttc
caatggccggggtcgcgggatattcaggatattgatgagcaggccgctgatcaggccgag
acattgaccatcgattcctacggtaagtcactgacgttttcattggatgatttcattcag
gttaacgccacgatcaatcatcatttgatagctaacgccatggcgttagctgagccccaa
aagcatgagagctggctggatttgttttgtggcatgggtaactttacttttgcattggcg
ccctatgtgaagcgggtgtggggcgtagaggcgattccggaaatgatcgaaaagtcgcgc
gccaatgcggttcggttgggggttgcaaacactgaatttctggtcgccgatttgcaggat
gaacaacagctcaaaaagctaccagatcggattgatggggttttgttggacccgcccagg
gcgggcgcaaaggaggcattggtcagggttgtcgcactgaaccctgcgcgcatcgtttat
gtgtcgtgcgacccagccacatttgcgcgcgatgcaacctatcttatccagcaaggttat
cgtttggcgcggttacagccgcacgatatgtttccccagacgatgcatctggaaactctg
gcgttgtttgtgcgtcgttaa
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