Simiduia agarivorans: M5M_03315
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Entry
M5M_03315 CDS
T02281
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
saga
Simiduia agarivorans
Pathway
saga03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
saga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
M5M_03315 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saga03400
]
M5M_03315 (recO)
DNA repair and recombination proteins [BR:
saga03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
M5M_03315 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
M5M_03315 (recO)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
AFU97874
UniProt:
K4KFM1
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All DBs
Position
complement(733926..734639)
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AA seq
237 aa
AA seq
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MIVLDGEPAFVLHSRHYGETSLIVDLFTRSHGRLAAYARGARKRSKKSASNPLAPFIPLI
VSTQGRGALKSLTMIDAVATPFKLSGRCLYCGLYLNELLMRVLPEQESQETIFQSYMQLI
GRLANIDDRELPAHELYLRRFEWQLIQAAGVSFSLEQEADTQRPLVPGQRYAYRHGLGLV
AAEIDAENAVGGDAILNFLSAPELTEAARTDLKRFMRQVLAPLLGRKPLASRALFSQ
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgtgctggatggcgaacccgcatttgtactgcattcccgccactacggcgaaacc
agcctgatcgttgatttattcacgcgtagccacggacgtttagctgcctacgcccgtggc
gcacgcaagcgctccaaaaaatcagcgtccaaccccttggcacccttcatccctttgatc
gtctccacacaggggcgtggcgcactcaagtccctgacgatgattgatgctgtcgcaacg
ccctttaagttgtctggcaggtgcctgtattgcggtttatacctcaatgaactgcttatg
cgggtgttgccggagcaggagtcacaggagacgatttttcagtcctatatgcagctcata
ggaaggcttgcaaatattgacgacagggagttgccggcccatgaactttatctgcgacga
tttgaatggcagttgattcaagcggccggtgtcagtttttcattggagcaggaggcggac
acccagcgcccgttggtgccaggccaacgttatgcttatcgtcacgggttgggcctggtt
gcggctgaaattgatgctgaaaacgctgtgggtggcgatgccatactcaattttctttcg
gcacctgagcttacggaggctgcgcgtaccgatctcaagcgtttcatgaggcaggtactg
gcacctttgttggggcgaaaaccgctcgcttctcgcgcactgtttagccagtaa
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