Simiduia agarivorans: M5M_03325
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Entry
M5M_03325 CDS
T02281
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
saga
Simiduia agarivorans
Pathway
saga03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
saga00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
M5M_03325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
saga03019
]
M5M_03325
03009 Ribosome biogenesis [BR:
saga03009
]
M5M_03325
03036 Chromosome and associated proteins [BR:
saga03036
]
M5M_03325
Enzymes [BR:
saga01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
M5M_03325
Messenger RNA biogenesis [BR:
saga03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
M5M_03325
Ribosome biogenesis [BR:
saga03009
]
Eukaryotic type
90S particles
RNase
M5M_03325
Prokaryotic type
rRNA processing factors
M5M_03325
Chromosome and associated proteins [BR:
saga03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
M5M_03325
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
AFU97876
UniProt:
K4KFZ5
LinkDB
All DBs
Position
complement(735516..736190)
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AA seq
224 aa
AA seq
DB search
MFTELQHRLGYQFNDVSLLKLALTHRSVSARNNERLEFLGDSLLSWVVTQYLYRHLTEAR
EGQMSRLRSRLVKGETLAEVARALCLQPELILSDGELKTGGRDRASTLADAVESLIGAIY
LDGGLEAASAAVHRWLGSRIIELNADTSAKDPKSELQEILQARQLPLPDYSVELTEGEGH
AQVFHVRCSILLHSLSASASATSRKKAEKAAAKLVLNQLREKND
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgtttaccgagttgcagcaccggctaggataccagtttaacgacgtatctttgctcaag
cttgccctgacacatcgcagtgtgagtgcaaggaacaatgagcggctggagtttctcggc
gacagtcttcttagttgggtggtaacccaatatctttatcgtcacctgaccgaagcccgc
gaagggcaaatgagccgtttgcggtcgcgcttagttaaaggtgagacattggcggaagtg
gcgcgcgcgttgtgtttgcagccagagctgatactcagtgatggtgagctgaaaaccggc
gggcgcgatcgtgcttctacactggcggatgcggtcgaatcattgattggtgcaatatac
ctggatggtggtcttgaagccgcttctgctgcagtgcaccgttggttgggcagccggatt
attgagctcaacgcggacaccagtgcgaaagatcccaaaagcgaattgcaggaaatactg
caggcccgtcagctgcccttgcccgattattctgtggagcttaccgaaggggaggggcac
gcccaggtgttccatgtgcggtgttccatcttgttgcatagcctgtctgcttcggcgagc
gcgaccagccgtaagaaggcagaaaaagctgcagccaaactggtgctgaaccaactgaga
gaaaaaaatgactaa
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