KEGG   Simiduia agarivorans: M5M_03325
Entry
M5M_03325         CDS       T02281                                 
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
saga  Simiduia agarivorans
Pathway
saga03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:saga00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    M5M_03325
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:saga03019]
    M5M_03325
   03009 Ribosome biogenesis [BR:saga03009]
    M5M_03325
   03036 Chromosome and associated proteins [BR:saga03036]
    M5M_03325
Enzymes [BR:saga01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     M5M_03325
Messenger RNA biogenesis [BR:saga03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     M5M_03325
Ribosome biogenesis [BR:saga03009]
 Eukaryotic type
  90S particles
   RNase
    M5M_03325
 Prokaryotic type
  rRNA processing factors
   M5M_03325
Chromosome and associated proteins [BR:saga03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     M5M_03325
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DND1_DSRM DSRM_2
Other DBs
NCBI-ProteinID: AFU97876
UniProt: K4KFZ5
LinkDB
Position
complement(735516..736190)
AA seq 224 aa
MFTELQHRLGYQFNDVSLLKLALTHRSVSARNNERLEFLGDSLLSWVVTQYLYRHLTEAR
EGQMSRLRSRLVKGETLAEVARALCLQPELILSDGELKTGGRDRASTLADAVESLIGAIY
LDGGLEAASAAVHRWLGSRIIELNADTSAKDPKSELQEILQARQLPLPDYSVELTEGEGH
AQVFHVRCSILLHSLSASASATSRKKAEKAAAKLVLNQLREKND
NT seq 675 nt   +upstreamnt  +downstreamnt
atgtttaccgagttgcagcaccggctaggataccagtttaacgacgtatctttgctcaag
cttgccctgacacatcgcagtgtgagtgcaaggaacaatgagcggctggagtttctcggc
gacagtcttcttagttgggtggtaacccaatatctttatcgtcacctgaccgaagcccgc
gaagggcaaatgagccgtttgcggtcgcgcttagttaaaggtgagacattggcggaagtg
gcgcgcgcgttgtgtttgcagccagagctgatactcagtgatggtgagctgaaaaccggc
gggcgcgatcgtgcttctacactggcggatgcggtcgaatcattgattggtgcaatatac
ctggatggtggtcttgaagccgcttctgctgcagtgcaccgttggttgggcagccggatt
attgagctcaacgcggacaccagtgcgaaagatcccaaaagcgaattgcaggaaatactg
caggcccgtcagctgcccttgcccgattattctgtggagcttaccgaaggggaggggcac
gcccaggtgttccatgtgcggtgttccatcttgttgcatagcctgtctgcttcggcgagc
gcgaccagccgtaagaaggcagaaaaagctgcagccaaactggtgctgaaccaactgaga
gaaaaaaatgactaa

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