Simiduia agarivorans: M5M_03395
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Entry
M5M_03395 CDS
T02281
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
saga
Simiduia agarivorans
Pathway
saga03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
saga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
M5M_03395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saga03400
]
M5M_03395
Enzymes [BR:
saga01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
M5M_03395
DNA repair and recombination proteins [BR:
saga03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
M5M_03395
Prokaryotic type
M5M_03395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AFU97888
UniProt:
K4KIT8
LinkDB
All DBs
Position
complement(748053..748745)
Genome browser
AA seq
230 aa
AA seq
DB search
MATIVEQLDAGWRAVFEQELAKPYMQSLRDFLKTRKRSGAEIYPPDALWFNAFLTTPLAD
VKVVIVGQDPYHGPGQAHGLSFSVPVGQALPPSLKNIYKELYAAPAEYPDGDLSHWARQG
VLLLNASLTVEQGQAASHAGKGWEQFTAACLQAVNRQCEHVVFLAWGRFAHKVCESIDAK
RHRVIKTSHPSPLGATKAGRDFVAFLGSDCFGEANRQLSQWGKPTVAWRR
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
ttggccaccattgtcgaacaactggatgccggctggcgcgctgtttttgagcaggagctg
gccaaaccttacatgcaatcgctgagggactttcttaaaacccgtaagcggtcgggtgct
gagatctatccgccggatgcgctgtggtttaatgcgtttctgacaacaccgctggcagac
gtaaaggtcgtgattgtcgggcaggacccttaccatggccccggccaggcccatggcctc
agcttcagtgtgccggtgggtcaggccttgccgcccagtctgaaaaacatctacaaagaa
ctctatgcagcgccggcggaataccccgatggcgacctgagccattgggccagacaaggt
gtattgctgttgaatgcatcgctcacggtagagcaggggcaggctgccagtcatgccggc
aaaggctgggagcagttcactgccgcttgtctgcaggcggtcaatcggcagtgtgagcat
gtggtgtttctggcctgggggcgatttgctcacaaggtgtgcgaatcgatagatgccaaa
cgtcatcgggtgattaaaacgtcacacccgagccccttgggtgcaaccaaggcgggtcgt
gattttgtcgcgtttttgggctcggattgctttggcgaagccaaccgtcagctgagccag
tggggcaagccaaccgtggcgtggcggcggtaa
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