KEGG   Simiduia agarivorans: M5M_04465
Entry
M5M_04465         CDS       T02281                                 
Name
(GenBank) type VI secretion ATPase, ClpV1 family protein
  KO
K11907  type VI secretion system protein VasG
Organism
saga  Simiduia agarivorans
Pathway
saga03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:saga00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    M5M_04465
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:saga02044]
    M5M_04465
Secretion system [BR:saga02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   M5M_04465
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 ClpB_D2-small AAA_16 AAA_22 AAA_25 nSTAND3 Sigma54_activat TniB NACHT AAA_7 Zeta_toxin Clp_N ATPase_2 AAA_18 Torsin Not3 Hpr_kinase_C ARM_KDM8_N MAD NBD_SMAX1
Other DBs
NCBI-ProteinID: AFU98100
UniProt: K4KIT0
LinkDB
Position
985892..988543
AA seq 883 aa
MININLKSLVDRMAPALRDALEGAAGLSMAQSHYHVELEHWLIKILDNGQSDLQLVLEKF
EIDVPQFARELGTAIGKFKTGSSRPAALSTSLVDAAKYAWMLASVEYGHGAITSGHLITA
ALLDGQLKDQLFTGCKELRSIAPESLREAARALIGAGKELPRTESSRSAVDPAGIEVSKS
PALDKYTINLTERAKKGEIDPVLGRDDEIRQCIDILTRRRQNNPILTGEAGVGKTAVVEG
FALRIAQGDVPEPLRNVAVRTLDLGLLQAGASVKGEFENRLKSVIEEVRASLTPIILFID
EAHTMIGAGGKEGQGDAANLLKPALARGELRTIAATTWAEYKKYFERDPALTRRFQVVKV
EEPDEATAIDMMRGIATSLTEHHKVRILDEAIIASVRLSHRYIPGRQLPDKSVSLLDTAC
ARVALSQSATPGAIEDCRRQIERAETTLKRLQREHAASNTQQEDIDLWHSQKQAAESRLS
ELEQQLVEETALIDEIKAIHQRIDAHFAGKEEDLISDDSFSNLQHSLVELSTKLKALQGN
TPLMQAAVDEQAIAEVIANWTGIPVGKMVDDEIRAVQSLATRLGERVIGQPHALEAVAQA
VRTSRAGLTDPRKPVGVFLFCGTSGVGKTETALALADQLFGGEQNITTINMSEFKEEHKV
SMLLGSPPGYVGYGEGGVLTEAARRKPYSVILLDEMEKAHPGVQDIFYNLFDKGTIKDGE
GRDIDFKNTVIIMTSNAGEDAIRAIFQQVEEKPEPDVLLDNIRPHLLRSFKPAFLGRANV
IAYYPRGSTTYLMKIAAINMRKIEHRVKSHYGAAFSYDEDVLLHIVARCQESDTGARNIE
NILNRTLLPTMAAECLEKLANGELIQKLHIGVTEEGDFTYQLS
NT seq 2652 nt   +upstreamnt  +downstreamnt
atgatcaacatcaatctgaaatcattggttgaccggatggcacctgcgttgcgggatgca
ctcgaaggggccgccggtctgtctatggcgcaaagtcactaccatgtagagcttgaacac
tggctgattaaaattctcgataacggccagtccgacctgcaattggtattggaaaaattt
gaaatcgacgtgccacagttcgcacgcgaattgggcacggctatcggaaaattcaaaacc
ggcagcagtcgacctgcagcactgtccaccagtctggtggatgctgccaaatatgcgtgg
atgcttgcatctgtggaatatggccacggcgctatcacctcgggccatctgatcactgca
gcattgctggatgggcagctcaaagatcaattgttcaccggctgcaaagagttacgctct
atcgctccagaatcattaagggaggcagctcgcgcgctaattggtgccggtaaagagcta
ccacggaccgagtccagcaggtctgctgttgaccctgcaggtatcgaagtctccaaatcg
cctgcgctggacaaatacaccatcaacctcacagagcgcgcaaaaaagggagagatcgat
cctgtattaggacgtgacgatgaaatcaggcaatgcatcgatatccttacccgccgtcgc
cagaacaacccaatcctgaccggtgaagccggcgttgggaaaaccgccgttgtagaaggc
ttcgccttgcgcattgcccaaggcgatgtacctgaacccctcagaaacgttgcggtccga
acactcgatctcgggctattacaggcaggcgcaagcgttaaaggtgaattcgaaaatcgc
ctcaagagcgtcattgaagaagtacgcgcttcgctaaccccgattatcctgttcatcgat
gaagcgcataccatgattggtgcaggcggaaaagaaggtcagggcgatgcggcaaactta
ctcaagccagcactggcccgcggcgagttacgcaccattgcagccacaacctgggcggaa
tacaagaagtatttcgaacgggatccagccctgacccgacgctttcaggtggtcaaggtg
gaagaacccgacgaggccacagctatcgatatgatgcgcggtatcgccacaagccttaca
gaacatcataaggtccggatactggacgaagccataatcgcatcggtcagattatcccat
cgctatatccccggcaggcaacttccagacaaatctgtcagcttactggataccgcttgt
gcccgcgttgcactcagccagtctgcaacacccggcgcaattgaagattgccgtcggcag
atagaacgcgccgaaaccacgttaaaacgcctgcaaagagaacatgcggccagtaacact
cagcaagaagatattgatctatggcatagccaaaagcaggccgccgaatcgcgattgtct
gaactcgagcagcagttagttgaagaaaccgccctaattgatgaaatcaaagcaattcat
caacgcatcgatgcccattttgccggtaaagaagaagacttgatcagcgatgacagcttc
tcaaacctgcaacacagcctggtagagctttccactaagctcaaagctctgcagggcaac
accccactgatgcaagcggccgtggatgagcaggccatcgccgaagtcattgcgaattgg
accggtattcccgttggaaaaatggttgatgatgaaatacgcgcggtccaatcgctcgca
acacgtctgggtgaacgggtaatcggtcaaccccatgcactggaggctgtagcgcaagca
gtccgcacttctcgtgccggcctcacagacccacgcaaacccgtgggcgtgttcctgttc
tgtggtaccagtggcgtcggaaaaactgaaacagccctggcattggcagatcagctcttt
ggaggtgagcaaaatattacgacgattaacatgtcggaattcaaggaagagcataaagtt
tctatgctgctaggctctccacccggttacgttggctatggcgaaggtggcgtactcaca
gaggcagcgcgtcgtaaaccctattccgttattctgttggatgaaatggaaaaggcacac
cccggtgtacaggatattttctacaacctgtttgataagggcaccattaaagacggtgaa
ggtcgtgacattgacttcaaaaatactgtcataatcatgacgtcaaatgctggtgaagat
gcaattcgggctattttccagcaagtggaagaaaaacctgaaccggatgtacttttggac
aatatccgcccgcatttattgcgcagcttcaaaccagcgtttttgggtcgagcgaatgtc
atcgcatattacccccgtggatcgacgacgtacctgatgaagattgcggcaattaacatg
agaaagattgaacatcgtgtcaagagtcattacggcgcagcgttcagctacgatgaagat
gttctgctgcatattgtcgcccgctgccaggaatctgacaccggcgcccgaaatatcgaa
aacattctcaaccggacattgcttcctacgatggcagccgagtgtttggaaaagcttgcc
aatggtgagctgatccaaaaactccatatcggtgttacagaggaaggtgatttcacctac
cagctgagctga

DBGET integrated database retrieval system