Simiduia agarivorans: M5M_04920
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Entry
M5M_04920 CDS
T02281
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
saga
Simiduia agarivorans
Brite
KEGG Orthology (KO) [BR:
saga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
saga03016
]
M5M_04920
Enzymes [BR:
saga01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
M5M_04920
Transfer RNA biogenesis [BR:
saga03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
M5M_04920
Prokaryotic type
M5M_04920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AFU98191
UniProt:
K4KGS8
LinkDB
All DBs
Position
complement(1094097..1095056)
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AA seq
319 aa
AA seq
DB search
MNFSLDFPFAYGRPAAVAGFRQACEDFVVVEQLGLEPAGQGEHWLVEILKRDDNTPWVAK
QLARLCGVSPRDVGYCGMKDRRAVTRQWFSVYLPKGDAPDWAALNSDTIHWLQSVRHTRK
LRRGEHAGNTFEIRLRDCASHRQDIEQRLSQIARLGVPNYFGEQRFGRDADNLQRVETVL
AKRGRKNTQEAMVLSAARSWLFNQVLAARVQAGNWCDFLPGETELTGPLWGRGRNPAPES
VCALEMQALAPWQTWLQGLEHAGLSQERRALILQPRDLQWHWDGDDLLLQFGLPPGQFAT
ALLRELAQLKTPDLDIGSV
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgaatttttcgctcgattttccctttgcttatggccgtcccgccgccgttgcgggtttc
cggcaggcgtgtgaagacttcgtggtagtagagcagttggggttggagcctgcggggcag
ggcgagcactggctggtggaaatactgaagcgtgacgacaatacgccctgggtggctaaa
cagctggcgcggctgtgtggcgtgagtccgcgcgatgtaggctactgtggtatgaaagac
cggcgggctgttacccgccagtggttcagtgtgtacctgcccaagggcgacgcaccggat
tgggctgcactcaacagcgataccattcactggctgcaaagcgttcgccacacacgcaag
ttgcgtaggggagaacatgccggtaatacgtttgaaatccggctgcgggattgtgcctcc
catcgacaggatatagagcagcgcctcagtcagattgcccgcctgggtgtccccaattat
tttggcgagcaacgttttggccgcgatgccgacaatctgcagcgcgtagaaacggtgttg
gccaagcgcggcaggaaaaacacccaggaggccatggtgctatctgccgcccgcagctgg
ttgtttaatcaggtgttggccgcgcgcgtgcaggcgggtaactggtgcgattttttgccc
ggggagacggaattaacggggccgctgtgggggcgggggcgaaatcctgctcctgagtct
gtctgtgcgctggaaatgcaggcattggccccttggcagacctggcttcagggcctcgaa
catgcaggcttgagccaggaacggagggcattaatcctgcaaccgcgggacctgcaatgg
cattgggacggggacgatttgttgttgcaattcggcttaccccctgggcagttcgcgacc
gcgttactcagagagctggcgcaattgaaaacgccggatttagacatcggatcagtgtga
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