Simiduia agarivorans: M5M_05375
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Entry
M5M_05375 CDS
T02281
Name
(GenBank) coproporphyrinogen III oxidase
KO
K02495
oxygen-independent coproporphyrinogen III oxidase [EC:
1.3.98.3
]
Organism
saga
Simiduia agarivorans
Pathway
saga00860
Porphyrin metabolism
saga01100
Metabolic pathways
saga01110
Biosynthesis of secondary metabolites
saga01240
Biosynthesis of cofactors
Module
saga_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
saga00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
M5M_05375
Enzymes [BR:
saga01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.98 With other, known, physiological acceptors
1.3.98.3 coproporphyrinogen dehydrogenase
M5M_05375
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GFIT
Motif
Pfam:
Radical_SAM
HemN_C
Motif
Other DBs
NCBI-ProteinID:
AFU98280
UniProt:
K4KJB4
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Position
1192595..1193980
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AA seq
461 aa
AA seq
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MTQAAFTWDQDLIDRYDLSGPRYTSYPTAPQFHNLISEQDIHQALARSDASQRPLSIYCH
IPFCDTVCYYCACNKIITANKARAVPYLERLFREMRQMAERIDVSRPVDQLHWGGGTPTY
LSLEQMTALMQHTRSLFNLHNDDSGEYALEIHPASVTPATIKGLRALGFNRLSMGIQDFD
ARVQKAVNRFNSVEEVTALTRAARDVDYHSISMDLIYGLPHQSVQSVSSTLDQVLALAPD
RLSLFNYAHMPHLFKVQKQLDERALPAAAEKLDMLHMAIDRLTREGYVYIGMDHFARPDD
ELARAQAAGQLHRNFQGYATHGHCDLLAFGVSAISQIDNLYLQNHKAIEDYDAALDAGAS
PVAKGFLMSQDDELRKAVIMALICQFELDFARIEQQFGIQFNDYFGAALAALQPMQADGL
LSLTDRRIRVKPAGRLLIRRICMAFDAYIPANTEQRFSRII
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaagcagcatttacctgggatcaggacctgatcgatcgctacgacctgtcgggc
ccgcgctatacctcctacccgaccgcgccccagttccacaacctgatcagtgaacaggac
attcaccaggcgctggcgcgcagcgacgccagccagcggccactatccatttactgccac
atccctttttgcgatacggtttgctactactgcgcctgcaacaaaatcatcaccgccaac
aaagcccgcgctgtgccctacctggagcggctgttccgtgaaatgcgccagatggccgag
cgcatcgacgtgagccggccggtggatcagctgcattggggcggcggcacgccaacgtat
ttgtcgctggagcagatgactgcgctcatgcagcacacccgctcgctgtttaacctgcac
aatgatgactcgggtgaatacgcgctggaaatccatccggccagcgtcacacccgccacc
attaaaggcctgcgggcactgggctttaaccgcttgtcgatgggcattcaggatttcgat
gcccgggtgcaaaaagccgtcaatcgcttcaacagcgtcgaagaagtcactgccctgacc
cgggccgcgcgcgacgtggactaccattccatcagcatggatctgatttatgggctgcca
caccagagcgttcaatcggtgagcagtacgttggatcaggttctggcgctggcaccggat
cgcttatcgttgttcaactacgcgcacatgccgcacctgttcaaagttcaaaagcagctg
gacgagcgcgccctgcctgccgccgctgaaaaactcgatatgctgcacatggccattgac
cggttaacccgcgagggctatgtgtacatcggcatggaccactttgcccgccccgacgat
gaactggcccgcgcgcaggcagccggtcagttgcaccgcaactttcaaggctacgccacc
catggccattgcgacctgctcgcctttggcgtgtcggcgatcagccagatcgacaatctc
tacttgcagaaccacaaggcgattgaagactatgacgccgcattggacgccggcgccagc
ccggtggccaaagggtttctgatgtcgcaagacgatgagttgcgcaaggccgtcatcatg
gcgctgatttgtcagttcgaactggattttgcgcgcatagagcagcaattcggcattcag
tttaacgattattttggtgccgcactggcagcgctccaacccatgcaagccgatggcctg
ctgagcctcacagaccggcgcattcgcgtcaaacctgccggccgcttgctgatccggcgt
atctgcatggccttcgatgcctatataccggccaataccgagcaacgtttttcgcgcatt
atttga
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