Simiduia agarivorans: M5M_05425
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Entry
M5M_05425 CDS
T02281
Name
(GenBank) 3-methyladenine DNA glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
saga
Simiduia agarivorans
Pathway
saga03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
saga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
M5M_05425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saga03400
]
M5M_05425
Enzymes [BR:
saga01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
M5M_05425
DNA repair and recombination proteins [BR:
saga03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
M5M_05425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AFU98290
UniProt:
K4KJC1
LinkDB
All DBs
Position
1205426..1206040
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AA seq
204 aa
AA seq
DB search
MSKPIHKHLLTASASLPHLHQLICHNGVLQLQKREPAELFEYLCQTVVGQQLSNKAAETI
WLRITGFCEEKDKPLFQLLTPRYAEKIRSCGLSRAKLKAMMGLRDAIKQGQLNEDIHTCQ
DPQRIINAITGLWGFGTWSAEMAALFFFAQPDIWSEKDAALARGLSILSSREHCHEQVLL
DAMRPYRSYFALHVWRGLDQGNLV
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcccatccacaagcaccttctgaccgccagtgcctccctgccgcatctccac
caattaatctgccacaacggtgtgctgcagctgcaaaagcgcgagcccgccgagctgttt
gagtatctgtgtcagacggtggtggggcagcagctctccaacaaagctgccgaaaccatc
tggctgcgcattaccggtttttgtgaagaaaaagacaaacccttgttccaattgctcacg
cctcgctacgctgaaaaaatccgcagctgtgggctgtcgcgggcaaaactcaaagccatg
atgggcttgcgggacgccatcaaacaggggcagttgaacgaagacattcatacctgccag
gacccgcaacggatcatcaacgcgatcaccgggctgtggggatttggcacttggtcagcg
gaaatggccgcattgtttttcttcgcccaaccggatatctggtccgaaaaagacgccgca
cttgcgcgcggtttatcgattctcagcagtcgcgagcactgtcacgagcaagtactgctc
gatgcaatgcgcccttaccgttcttattttgctctgcatgtctggcgcggattggatcaa
ggtaatctggtctga
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