Simiduia agarivorans: M5M_06660
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Entry
M5M_06660 CDS
T02281
Name
(GenBank) helix-turn-helix, AraC type
KO
K02014
iron complex outermembrane recepter protein
Organism
saga
Simiduia agarivorans
Brite
KEGG Orthology (KO) [BR:
saga00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
saga02000
]
M5M_06660
Transporters [BR:
saga02000
]
Other transporters
Pores ion channels [TC:
1
]
M5M_06660
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
AFU98527
UniProt:
K4KX62
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All DBs
Position
complement(1495214..1497619)
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AA seq
801 aa
AA seq
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MISPLNKKQPLAMAVAGVLALAAVPHALAQEESIGLEEVIVTAERREASLQSTAIAVTAM
SQETLVENDILNVTGLNGFVPNLVVSGQEDQSDIKIYIRGVGTNNPTETGDQGVGVYVDG
VFAARAQGALALMYDLENIQVLRGPQGTLFGRNNTGGAMLLTTRRPGKEFEGDVQMTYGS
FNRQQVSGGVTLPVTDSLSFRVAAYSDQDDGWVKPIDTDPRGLAGEFSGPTTLRTANTVG
LKLNNTDVRSARLTGLWEITDGLDWSLSYETFTDQGNTGILLNPVEVEKGNFNTFIDSPV
SLHMQSDVVRSTVSYDITDGINVEYIFGASDLSREQVVDQDAGVLSMFREARTEYQNSTA
ASHELKFQNLDAETLEWTVGLYYFEEETAIRFDFDGDGPWLNQRGATFIQPARGSESAAA
YGQLTYHITDEFSVTGGLRYTDDLKYDRGGRNYGDDCDGYIRPTLGGSALVTFEDFLNNR
TGAEGADGLDDLTGLERTRGSCKADKRNDVEVEDDQLTYLVRASYEWDDQLAYLSVGSGY
RAGVIQDAGGATEPENSTSYELGYKVDFERVRLNAAAFFMQYDNLIRSGYDEEENQIVNS
NVAGAEISGLELELTWLVGEAGMVDFSGGYLDAHYTDYVVDNGGYGDNNTPILDENGEPT
GLYDLAGNIMPQSPEFSFNIGFRWDFALAKGTLTPRFNMRWVDDVYFRDQNENSAAINNV
INDVQQTGRYYGNPAGQDAHTKVNLGLMYDSGENWTVDLFVNNATNEMTKSSSSVDNNTA
AGFPGRYAAPRTAGVRFAASF
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgattagcccgctgaacaaaaaacaaccgctggcaatggcggttgcgggagttctcgct
ctggctgccgtgccccacgcgctggcccaagaggaatccattggacttgaggaagtgatt
gtcaccgccgaacggcgcgaggcctcactgcaaagtacggccatcgcggtcacggccatg
agccaggaaacgctggttgaaaacgatattctgaacgtcaccggcctcaatggcttcgtc
cccaacctggtggtatccggccaggaagatcaaagcgatatcaaaatttatatccgcggc
gtgggtaccaacaaccccaccgaaaccggcgatcagggcgtaggtgtgtatgtggatggc
gtcttcgccgcgcgtgctcagggcgccttggcgctgatgtacgacctggaaaatatccag
gtgttgcgtggcccccagggcacactgttcggacgcaacaacaccggcggtgccatgctg
ctcaccacccgccgtccgggtaaagaattcgaaggcgacgtgcagatgacctatggcagt
ttcaatcgccagcaggtgtctggtggcgtgaccctgccggtcaccgacagcctgtccttc
cgcgtagcggcctattctgatcaggacgatggctgggtcaaacccattgataccgatccg
cgcggtctggccggtgaattttccgggccaaccaccttgcgcaccgccaacaccgtaggg
cttaaactcaacaataccgacgtgcgctcggcgcgattgaccggtctgtgggaaatcacc
gatggcctggactggagcctttcctacgagaccttcaccgaccagggcaacaccggtatt
ttgctgaatccggtggaagtggaaaaaggtaactttaacacctttatcgattcgcccgtg
tctctgcatatgcaaagtgatgtggttcgctccaccgtaagttacgacatcaccgatggc
atcaacgtggaatacattttcggcgccagtgacctgagccgtgaacaagtggtggatcag
gatgcgggagtactgtccatgttccgcgaagcccgcaccgaatatcagaactccacggcg
gccagccatgagctgaaattccagaacctcgatgccgaaaccctggagtggaccgtgggt
ctgtattatttcgaagaagaaaccgccatccggtttgactttgatggcgatggcccctgg
ctgaaccagcgcggtgccacctttatccagcccgcgcgcggttcggaatcggccgcggcc
tacggtcagctgacctaccatatcaccgatgaattttcggtgaccggcggtttacgttac
accgacgatctgaaatacgaccgcggtggccgcaactacggcgacgactgcgatggttat
atccggcccacattgggcggctcggcgctggtgacctttgaagatttcctcaacaaccgc
accggtgcagaaggtgccgatggcctggacgatctcaccgggctcgagcgcacccgcggc
agctgtaaagccgacaaacgcaacgacgtggaagtggaagatgatcagctcacctatctg
gtgcgcgcatcttacgaatgggatgaccagctggcgtacctgagtgtgggctccggctac
cgtgccggtgtgattcaggatgccggtggcgccaccgagcctgaaaacagcaccagctat
gaactgggttacaaagtggatttcgagcgcgtgcgcttgaatgccgccgccttcttcatg
cagtacgacaacctgatccgctccggttacgatgaagaagaaaaccagattgtgaactcc
aatgtggcgggcgcggaaatttccggtctggaactggagttgacctggctggtgggtgag
gccggtatggtcgatttctcgggtggctatctggatgcacattacaccgattatgtggtg
gataacggcggttatggcgacaacaacacgccgattctggatgaaaacggcgaacccacc
gggctttacgatctggccggcaatatcatgcctcagtcgccagaattttctttcaacata
ggtttccgctgggacttcgctctggccaaaggcacgctcacgccgcgcttcaatatgcgc
tgggtggatgatgtctacttccgcgaccagaacgaaaacagcgctgcaattaataacgtc
atcaacgatgtgcaacaaaccggtcgttactacggtaatccggccggtcaggacgcacat
accaaggtcaatctggggctgatgtacgactcaggtgaaaactggacggtggatctgttt
gtcaataacgccaccaacgaaatgaccaagtccagctcctcggtagataacaacactgcc
gccggtttcccgggccgctacgccgcaccccgtaccgccggtgtgcgtttcgctgccagc
ttctga
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