Simiduia agarivorans: M5M_07100
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Entry
M5M_07100 CDS
T02281
Name
(GenBank) Zn-finger, DksA/TraR C4 type
KO
K08305
peptidoglycan lytic transglycosylase B [EC:
4.2.2.29
]
Organism
saga
Simiduia agarivorans
Brite
KEGG Orthology (KO) [BR:
saga00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
saga01011
]
M5M_07100
Enzymes [BR:
saga01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
M5M_07100
Peptidoglycan biosynthesis and degradation proteins [BR:
saga01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
M5M_07100
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Paralog
GFIT
Motif
Pfam:
SLT_2
bMG10
MHB
Motif
Other DBs
NCBI-ProteinID:
AFU98615
UniProt:
K4KK61
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All DBs
Position
complement(1594601..1595593)
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AA seq
330 aa
AA seq
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MFKSLKTMTALLLGSAVTLAAQADYSKHPDAKALIDELVASEVATQAQLAQWFASASQQK
SILEAIARPAEKTKTWAEYSRIFLTGDRIDKGVGFWREHADTLARAEAEYGVPAAMIVAI
IGVETRYGRNMGSYRVIDALSTLAFDYPPRSAFFRKELAEFIRLTQEQKQDPLALKGSYA
GAMGYGQFMPSSFRAYAVDYDGDAIADIWANPVDAIGSVANYFARHGWQTGQPVTLRVRV
SADHDAALLNTNLKPDVTVANARAAGFEPVTSLPDAEMVTLYQLEGDHGAEFWAGTQNYY
VITRYNRSRMYALAAWQLSQKIEQAYQAGN
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaatctttgaaaacgatgaccgcgttgttgttgggctctgcagttacactggcg
gcgcaggccgattacagcaaacatcccgatgcgaaggcactgattgatgagctggtggcc
agcgaagtggcaacccaggcgcaactggcgcagtggtttgccagtgccagccagcaaaaa
agtattctggaggccattgcccggcccgccgaaaaaaccaaaacctgggcggaatactcc
cgcatttttctgaccggtgatcgcatcgacaaaggcgtcggtttctggcgtgaacatgcc
gataccctggcgcgggctgaagcggagtacggagtgcccgctgccatgattgttgccatt
atcggtgttgagacccgttatggtcgcaatatgggcagttaccgggtgatcgatgcgctc
tcgaccctggcgtttgactacccgccgcggtccgcgtttttccgcaaggagctggccgag
tttatccgtctgacccaggagcagaaacaggatcctctggcgttgaaaggttcttatgcc
ggcgccatgggctacggacaatttatgccgtccagctttcgcgcctatgcggtggattac
gatggcgacgccattgccgatatctgggcaaacccggtggatgccattggtagcgtggcc
aattattttgcccgacatggttggcaaaccgggcaaccggtgaccctgcgggtcagggtg
tcggcggaccacgacgcggccctgctcaacaccaacctgaaaccggacgttaccgtggcc
aacgcacgcgcagccggatttgaaccggtgacttcgctgcctgacgctgaaatggtaacc
ttataccaactggaaggtgaccacggcgccgagttctgggccggtacccagaattattat
gtgataacgcgctacaaccgcagtcgcatgtatgcactcgctgcctggcagctgtcccag
aaaatcgaacaggcttatcaggccggcaactga
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