Simiduia agarivorans: M5M_07335
Help
Entry
M5M_07335 CDS
T02281
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
saga
Simiduia agarivorans
Brite
KEGG Orthology (KO) [BR:
saga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
saga03016
]
M5M_07335 (truB)
Enzymes [BR:
saga01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
M5M_07335 (truB)
Transfer RNA biogenesis [BR:
saga03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
M5M_07335 (truB)
Prokaryotic type
M5M_07335 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
DUF3072
PUA_3
HSDR_N
Motif
Other DBs
NCBI-ProteinID:
AFU98662
UniProt:
K4KXN3
LinkDB
All DBs
Position
complement(1643306..1644259)
Genome browser
AA seq
317 aa
AA seq
DB search
MGRRAKGRPVSGVLVLNKPTGISSNLALQKAKRLFYVAKAGHTGSLDPLATGVLPLCFGE
STKFSQFLLDADKGYDATIRLGERTDSSDSDGELVEKTDASHITEAQVAKALEAFRGQIQ
QVPSMFSALKKDGQPLYKLAREGVEVEREARTVTVYALELLDFRPGDVAEVDISVKCSKG
TYIRSIAEDLGQALAVGGHISRLHRTQAGPFTDAQAVTLEALAEERGEGLAEVLDHHLLP
VDAPVASLPELALIADSAYYFRRGNPVMDARAFALGGVGDMVRVFDDTEQFLGIGELTDD
GMVAPKRLVATVSTPEG
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgacgcgcaaaaggccgcccggtaagcggcgtattggtattgaacaagcccacg
ggcatctcgtccaaccttgccctgcagaaagccaagcggttattttacgtggccaaagcc
ggccacaccggcagccttgatcccctggcgaccggtgttctgcccctgtgttttggtgaa
tccaccaagttttcccagtttctgctcgatgccgataaaggctacgacgccactattcgc
ctgggtgaacgcaccgacagttccgacagcgatggcgaattggtagaaaagaccgatgct
tcccacatcaccgaagcacaggtcgccaaagcgttggaggccttccgggggcaaatccag
caggtgccctccatgttttcggcgctgaagaaagacggccagccgttgtataagttggcg
cgtgaaggcgtggaagtggagcgggaagcccgtactgtaacggtttacgcattggaattg
ctcgatttcagacccggtgacgtggccgaggtggatatcagcgtcaagtgctccaagggc
acctatatacgctccattgcagaagatctggggcaggcactggcggtgggtggccatatc
agccgtttacaccgtacccaggcggggccttttaccgatgcccaggccgtgacgctggag
gccttggccgaagagcgtggtgaagggttggccgaagtgctggatcaccatcttttaccg
gtcgatgccccggtggccagcctgcctgaactggcgctgattgccgactcagcctactat
tttcgccgtggtaacccggtaatggacgcgcgggcctttgccttgggcggggttggtgat
atggtgcgtgtcttcgacgatactgaacaatttttaggcatcggcgaattgaccgatgac
ggcatggtcgcgcccaagcgactggtggccacagtttcgacgcctgaaggctga
DBGET
integrated database retrieval system
