Simiduia agarivorans: M5M_07350
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Entry
M5M_07350 CDS
T02281
Symbol
nusA
Name
(GenBank) transcription elongation factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
saga
Simiduia agarivorans
Brite
KEGG Orthology (KO) [BR:
saga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
saga03021
]
M5M_07350 (nusA)
03009 Ribosome biogenesis [BR:
saga03009
]
M5M_07350 (nusA)
Transcription machinery [BR:
saga03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
M5M_07350 (nusA)
Ribosome biogenesis [BR:
saga03009
]
Prokaryotic type
rRNA transcription factors
M5M_07350 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
DUF4332
KH_NusA_C
KH_KhpA-B
KH_2
Motif
Other DBs
NCBI-ProteinID:
AFU98665
UniProt:
K4KKE2
LinkDB
All DBs
Position
complement(1647424..1648929)
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AA seq
501 aa
AA seq
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MNKEILLVAEAVSNEKGVDRGVIFEAIETALATATKKRYEEDSDIRVVIDRKDGSYETYR
RWLVVDDDTLAELGTQFTLEEAHEVDPNLKAGDVYEEQVENVEFGRIAAQTAKQVIVQKV
REAERAQIVEEYRHRIGELVNGTVKKVTRDAVIVDLGNNAEGLLPRDQLVGREVFRMNDR
VRALLLDVRPDARGPQLYLSRSCPEMLIELFKIEVPEISEEVIEIKGAARDPGSRAKIAV
KTNDGRIDPVGACVGMRGSRVQAVSNELGNERVDIVLWDDNPAQFVINAMSPAEIESIVV
DEDTESMDVAVEEDNLAQAIGRGGQNVRLASELTGWTINVMSIDDWNSKQQEESGNFVEV
FMNALDVDEEVAEVLVEEGFTTLEEVAYVPLEEMLAIDGFDEDIAEELRARAKDALLTQA
LATEEKLDTEPAQDLLTMEGMDKHTAYLLAAAGVISMEDLAEQSVDDLLDIEGMDEERAA
ALIMKAREPWFADETDSADEQ
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagagattttgctggttgccgaggcggtgtccaacgaaaaaggcgtagaccgt
ggcgtgatttttgaggccattgagactgcgttggcaactgccaccaaaaagcgctacgaa
gaagactcggatatccgcgttgtgatcgaccgcaaagatggcagctacgaaacctatcgc
cgctggttggttgttgacgacgacaccctggccgaattgggcacacagttcacgttggaa
gaagcccacgaagtggaccccaacctgaaagccggtgatgtgtacgaagagcaggttgaa
aacgttgagtttggtcgcatcgcagcccaaaccgctaagcaggttattgtgcagaaagtg
cgcgaagccgaacgtgcacaaatcgttgaggaataccgtcaccgcattggtgagctggtc
aacggcaccgttaaaaaagtgacccgcgatgcggtgattgtggatttgggtaacaacgct
gaaggcctgttgcctcgcgatcagctggtgggacgtgaagtcttccgcatgaacgaccgt
gtgcgtgcgttactgttggatgtgcggcctgatgcccgcggtccccagctgtacctgagc
cgttcctgcccggaaatgctgattgagctgttcaagattgaagtgcccgagatttccgag
gaagtgatcgagatcaaaggcgctgcccgcgacccgggttcacgcgccaaaatcgcggtg
aaaaccaacgacggccgtattgaccctgtcggcgcctgcgtgggtatgcgtggttctcgt
gtacaggctgtgtcgaacgaattgggtaatgagcgcgttgatatcgtgctttgggatgat
aacccggcgcaatttgtgatcaacgccatgtcgccggctgaaatcgaatccattgtggtg
gatgaagatactgagtccatggacgtggcggttgaagaagacaatctggcccaggccatt
ggtcgtggtggtcagaatgttcgcctggcgtccgagctgactggctggaccatcaatgtc
atgagcattgatgactggaattccaagcagcaggaagagtccggtaactttgttgaagtg
ttcatgaacgcactggatgtggatgaagaagtcgctgaagtgctggtggaagaaggcttc
accacgctggaagaagtggcttatgtgcctctggaagaaatgttggctatcgatggcttc
gacgaagatattgccgaagagttgcgtgctcgcgccaaagatgcgctgctgacccaggcg
ctggccacagaagagaaactggataccgagccggcacaggacctgctcacaatggaaggc
atggataagcacacggcttatctgctggcagctgctggcgtaatttcaatggaagatctg
gccgaacaatcggtagacgatcttttggatattgaaggaatggatgaggagcgcgccgcc
gctctgatcatgaaagcgcgtgaaccctggtttgccgatgagacagacagcgcggacgag
caataa
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