Simiduia agarivorans: M5M_08495
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Entry
M5M_08495 CDS
T02281
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
saga
Simiduia agarivorans
Pathway
saga00071
Fatty acid degradation
saga00280
Valine, leucine and isoleucine degradation
saga00310
Lysine degradation
saga00362
Benzoate degradation
saga00380
Tryptophan metabolism
saga00410
beta-Alanine metabolism
saga00640
Propanoate metabolism
saga00650
Butanoate metabolism
saga00907
Pinene, camphor and geraniol degradation
saga00930
Caprolactam degradation
saga01100
Metabolic pathways
saga01110
Biosynthesis of secondary metabolites
saga01120
Microbial metabolism in diverse environments
saga01200
Carbon metabolism
saga01212
Fatty acid metabolism
Module
saga_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
saga00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
M5M_08495
00650 Butanoate metabolism
M5M_08495
09103 Lipid metabolism
00071 Fatty acid degradation
M5M_08495
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
M5M_08495
00310 Lysine degradation
M5M_08495
00380 Tryptophan metabolism
M5M_08495
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
M5M_08495
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
M5M_08495
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
M5M_08495
00930 Caprolactam degradation
M5M_08495
Enzymes [BR:
saga01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
M5M_08495
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
M5M_08495
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
M5M_08495
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
AlaDh_PNT_C
2-Hacid_dh_C
NAD_binding_2
RS_preATP-grasp-like
UDPG_MGDP_dh_N
F420_oxidored
Motif
Other DBs
NCBI-ProteinID:
AFU98888
UniProt:
K4KLF0
LinkDB
All DBs
Position
complement(1883467..1885461)
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AA seq
664 aa
AA seq
DB search
MVITSAKKVFFAGGDLNELLAAKPGDEAAFFAMVEKIKSQLRALERLPVPVVAAINGAAL
GGGFEICLACNYRVAVDSPAVSLGLPEVSLGLLPGGGGIVRMVNLLGLEAALPYLLEGKK
ADAGRALAAGLIHATVADQSQLVPAAKAWIASQVDNPDAALQPWDHKGHKIPGGSAGSPK
LAQLLAIAPAMLAQKTRGLLPAPEKILDCAVEAARLDFDTALRKEGRAFTELVMTPEAKN
MITTFFFQLNKINAGASRPDNIAPHTVKKLGVLGAGMMGQGIAYVAAKVGIDVVLKDISM
AAAEKGKAYSAKLVEKQVARGRLDLAGAEALLARIQPTERDQDLAGCDLIIEAVFEQIDL
KNKITLGTEQYLSDDGFWGSNTSSLPITQLAEASAHPEKFIGIHFFSPVDKMPLVEIICG
KKTSDETLARAFDFVRQIKKTPIVVNDSLAFFTSRTFSTYLDEAARMVVEGIHPVVVDNL
GKAVGMPVGPLTVHDEVSLELTRKIHQTWADMGVENQWGEHDAMAEIIKTLVVEHGRGGK
HYNGGYFDYGDQGKTIWPGLLDKYFDGGNATPEQDIKDRLLFRQVIETLKCLESGVLRSV
ADANIGSIMGIGAPVHTGGFVQFINTYGLERFRARCAELADAYGERFKCPAIVSEKIERA
ETFN
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
gtggtgatcaccagcgccaaaaaagtgttttttgccggcggcgatctgaatgaattattg
gccgccaagcccggtgacgaagccgcattctttgccatggtggaaaaaatcaaaagccag
ctgcgtgcgctggagcgattgccggtgccggtggtggcggccatcaatggagcggcgctc
ggcggcggatttgaaatctgcctggcctgtaattatcgcgttgcggtggattcgcccgcg
gtatcgctgggtttgcccgaagtgtctctgggcttgttgcccggtggcggtggcattgtc
cgtatggtcaatttgctggggcttgaagcggccttgccgtatttactggaaggtaaaaaa
gcagatgccggacgcgcattggcggcgggtctgatacacgccaccgtggcggatcaatcc
caactggtgccagcggccaaagcctggatagcatcacaagtcgacaacccagatgctgcg
ttgcaaccctgggaccacaaaggccacaaaatacccggtggttcagccggctcacccaag
ctggctcaattgttagctattgctccggcgatgttggcgcagaaaacccgtgggcttttg
ccggcgccggaaaaaattctcgattgtgcggtggaagcggcaaggctggattttgatacg
gctttgcgcaaagaagggcgggcctttaccgaactggtcatgacgcccgaagcgaaaaac
atgatcaccacgtttttcttccagctcaataaaatcaacgccggtgccagccggccggac
aatatcgcaccacacacggtgaagaaactgggtgtgctcggtgccggcatgatgggccag
ggcatcgcctatgtggccgccaaggtgggcattgacgtggtgctgaaagatatttccatg
gcggcggcagaaaaaggcaaagcctattccgccaagctggttgaaaaacaagtggcccgc
ggccggctggatctggccggtgccgaggccctgcttgcccgcattcagccaacagagcgc
gaccaggacctggccggctgcgatctgattattgaagccgtgtttgagcagattgatctc
aaaaacaaaatcaccttgggtaccgagcagtatctgtcagatgatggattctggggctcc
aatacctccagtctgcccattacccagttagccgaagccagcgcccacccggaaaaattt
atcggtatccacttcttttctccggtggacaagatgcctttggttgagattatctgcggc
aaaaaaaccagcgatgaaaccctcgcgcgggcgtttgattttgtccggcaaattaaaaaa
acgcccattgtggtcaacgactccctggcgtttttcacctcccgcaccttctccacttat
ctggacgaagcggcccggatggtggttgagggcattcatcccgtggtggtagacaacctg
ggcaaggcggtgggtatgccggtggggccattgactgtgcacgatgaagtcagtctggaa
ctgacccgcaaaattcaccagacctgggccgacatgggggtggaaaaccagtggggcgag
cacgacgccatggccgaaattatcaagaccttggtggtggaacatggccggggtggcaaa
cactataacggcggctattttgattacggcgatcagggcaaaaccatttggcctggcttg
ctggataagtattttgatggcgggaatgcaacgccggaacaggacatcaaagaccggttg
ttattccgtcaggtgattgaaacactcaaatgcctggagtcgggcgttctgcgctcggtg
gcggatgccaatatcggttcgattatgggtattggtgcgccggtgcatacgggcggcttt
gtgcaattcattaacacctatggtcttgaacgtttccgcgcacgttgcgccgagttggcc
gatgcctacggtgagcgttttaagtgtccagccattgtctcggaaaaaatcgagcgggct
gaaacgtttaactga
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