Simiduia agarivorans: M5M_10820
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Entry
M5M_10820 CDS
T02281
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
saga
Simiduia agarivorans
Brite
KEGG Orthology (KO) [BR:
saga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saga03400
]
M5M_10820
DNA repair and recombination proteins [BR:
saga03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
M5M_10820
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DUF7125
DnaB_C
Lon_C
SLFN-g3_helicase
RecA_N
AAA_22
nSTAND_NTPase5
GvpD_P-loop
AAA
AAA_16
ABC_tran
AAA_24
PAXNEB
Rad51
nSTAND3
AAA_30
AAA_14
Zeta_toxin
Viral_helicase1
NTPase_1
DZR
cobW
Zn_ribbon_Thio2
Motif
Other DBs
NCBI-ProteinID:
AFU99343
UniProt:
K4KMM7
LinkDB
All DBs
Position
complement(2415822..2417186)
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AA seq
454 aa
AA seq
DB search
MAKAKTAFVCNECGADYRKWQGQCSECGAWNSVAEIRLAPATRAPSVASGGYAGATTGKI
QKLSDISLEDLPRVSTGMAEFDRVLGGGLVPGSVVLIGGHPGAGKSTVLLQTLCKLAETM
PALYVTGEESLQQVAMRARRLNLPTDKLSMLSETNIELIAQQAEIHQPKVMVVDSIQVMH
LSDVQSAPGSVSQVRESAAFLTRFAKQTGTVLLLVGHVTKDGSLAGPKVLEHMIDCSILL
EGSHDSRFRTLRGNKNRFGAVNELGVFAMTEQGLREVTNPSAIFLQRADDIASGSIVMVV
WEGTRPLLVEVQALVDSSNMGNPRRVAVGLDQNRLSMLLAVLHRHGGIMVGDQDVFVNVV
GGVKVVETSVDLALLLAIVSSFRDQALPQDLIAFGEVGLSGEIRPVPSGQERLREAAKHG
FKRAIVPKSNVPKGGIAGMEIVAVKTLNEALEAI
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaggccaaaaccgcgtttgtttgtaatgagtgcggtgcagattatcgcaaatgg
cagggccagtgcagcgaatgcggggcttggaacagtgtggcggaaatccgcttggcgccg
gccactcgtgcaccgtccgttgccagcggcggctatgccggcgccaccaccggaaagata
caaaagctgtcggatatcagtctggaagatctgccccgggtcagcaccggcatggcggag
ttcgaccgggtgttgggtggtggcctggtacccggctcggtagtgctcattggcggccac
ccgggcgcaggcaaatccacggtgctgctgcaaaccctgtgcaagctggcggaaaccatg
ccggccctgtatgtgacaggtgaggagtcgctgcagcaggtggccatgcgcgctcgtcgt
ttgaatttgcccaccgacaaactctcgatgctgtcggaaaccaatatcgaactcatcgcc
cagcaggctgaaatccatcaacctaaagtgatggtggtggattccattcaggtgatgcac
ctgagtgatgtgcaatcggcgccgggttcggtgagccaggtgcgcgaaagtgccgccttc
ctgacccgcttcgcgaaacaaaccggcacggtcttgttgctggtaggccatgtgaccaaa
gacggctcattggcgggcccgaaagtgctggagcacatgatcgactgttcgattctgttg
gaaggctcgcacgattcccgcttccgtaccctgcgcggcaataaaaaccggtttggtgcc
gtgaacgaattgggtgtgtttgccatgaccgaacagggcttgcgcgaagtcaccaatcct
tcagcgatttttttgcagcgcgcggatgacatcgcttccggctccattgtcatggtggtg
tgggaaggtacccggccgttgctggtggaagtgcaggcactggtggacagttccaacatg
ggcaatccgcgccgggttgcggtgggactggatcagaaccgtttgtcgatgctgctggcc
gttttgcaccgccacggcggcattatggtgggcgatcaggatgtattcgtgaacgtggtg
ggtggcgtgaaagtggtggaaaccagcgtggacctggcgctgctgctcgccattgtgtcc
agtttccgcgatcaggctttgccacaggatcttatcgcctttggcgaggtaggtttatcg
ggcgaaatccgcccggtaccgtccggccaggagcgtttgcgcgaagccgccaagcacggc
ttcaaacgcgcgattgtgcccaagtctaacgtgcctaaaggtggtattgcgggtatggaa
attgtggcagtgaaaacgttgaatgaagcgcttgaggcgatctga
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