Simiduia agarivorans: M5M_11875
Help
Entry
M5M_11875 CDS
T02281
Name
(GenBank) arginine decarboxylase
KO
K01585
arginine decarboxylase [EC:
4.1.1.19
]
Organism
saga
Simiduia agarivorans
Pathway
saga00330
Arginine and proline metabolism
saga01100
Metabolic pathways
saga01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
saga00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
M5M_11875
Enzymes [BR:
saga01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
M5M_11875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
OKR_DC_1_C
DegT_DnrJ_EryC1
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
AFU99552
UniProt:
K4L051
LinkDB
All DBs
Position
complement(2638518..2640467)
Genome browser
AA seq
649 aa
AA seq
DB search
MAGNPQAKCRVLLVTEEPGFGERWIRELKQVAETDDGSPIRLHISQGRADKLASYLADGM
TQIVALDEHSLGDKGLDSCYQQVRATRAEIDCFLLTSSTNPVTETVYEGVLSRAESNYGV
VYRSLRRVLLERTATPFADALKEYVFAARDSWHTPGHSSGDSLSSSPWVVDFYRFMGEHM
FNTDLSVSVKMLDSLMEPVSVIRNAQNLAAKTFGARHTYYVTNGTSTSNKIVLQYLMRHG
DKVIVDRNCHKSVHHAMIMSGSIPVYLESSVNQNYGVYGPVSKARIFAAIDENPEARLLI
LTSCTYDGMRYDLKPIIEYAHAHNIRVLIDEAWYAHGRFHPEFRPTALECGADFVTHSTH
KMLSAFSQASMIHVGHGVKNFDAARFREDINMHTSTSPQYGMIASLDVARKQMSIEGFSV
MSRTLGFVQEIRDYVKEHTAFRVLDVEDLCDPSLKDDGIRLDVTKVTIDVGVAGMSAPTV
QAELFNDYGIQIEKNTHNTLTVLVTIGTTESKVLRLKQALQKISQKAPGVPLEHKHQSIP
SLPPMRVLPRTAYFAEGEKLPLTQDAHKGELVARVACDEIVPYPPGIPLVVPGQELTADI
LSAIANYVYERKDLEMHGVQTINGVPHIRVMRKEAEAEGKAELTRLAGH
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaaatccccaggcgaaatgcagagttttattggtcaccgaggagcccggcttc
ggcgagcgctggatacgcgagctgaaacaggtggccgaaacagacgatggctcgcccatc
cggctgcatatcagccaggggcgcgccgacaagctggccagttacctggccgacgggatg
acacagattgtcgccctggatgagcactcgctgggcgataaaggcctggacagctgttac
cagcaggtgcgggcaacccgtgcggaaatcgactgcttcctgcttaccagcagtaccaat
ccggtcaccgaaaccgtgtatgaaggtgtcttgtcgcgggccgaatccaactatggcgtg
gtgtaccgcagccttcggcgggttttgctcgagcgaaccgccacgccttttgccgacgcc
ttgaaagagtacgtatttgccgcgcgcgattcctggcacacgccgggccactccagtggc
gacagcctgagctccagtccctgggtggtggatttctaccggtttatgggcgagcacatg
ttcaacaccgatctgtcggtgagcgtgaaaatgctggactcgctgatggagccggtgagt
gtgatccgcaatgcccagaatctggcggccaaaacctttggcgcacggcacacctactac
gtcaccaatggcaccagcacctcaaataaaattgtcttgcagtacctgatgcgacacggt
gacaaggtcattgtggaccgcaattgtcacaagtctgtgcaccacgccatgatcatgagt
ggttccattcccgtgtatctggaatcctcggtgaatcagaattacggcgtttatggtccg
gtgtccaaggcccgcatttttgcggccatcgatgaaaacccggaagcccgcctgctgatc
cttaccagctgtacctacgacggcatgcgctacgatctgaagcccattattgaatatgcg
cacgcacacaacatccgcgtactgatcgacgaagcctggtatgcgcacgggcggttccat
cccgaattccgtcccaccgcgctggaatgcggcgccgattttgtgacccattccacgcac
aaaatgctgtcggcattttcacaggcatcgatgattcacgtgggccacggggtgaaaaat
ttcgacgccgcgcgttttcgtgaagacatcaacatgcacacgtccaccagtccccagtac
ggcatgattgcgagcctggatgtggcgcgtaaacaaatgagtattgaaggattttcggtc
atgagtcgcacgctcggctttgtgcaggaaatccgtgattacgtgaaagagcacacggcg
ttccgggtattggatgtggaggacctgtgtgatccatcgttgaaagacgatggtatccgg
ttggatgtgaccaaggtcaccattgatgtgggcgtggccggcatgtcggcacccaccgtg
caagcggaattgtttaacgactacggcatccagattgaaaagaatacccacaataccctg
acggtattggtgaccattggcacgaccgaaagcaaagtgctgcgtctgaaacaggcgttg
cagaaaatttcgcaaaaagcgcccggcgtaccacttgagcacaaacatcaatccattccg
tctttaccgcccatgcgggtactgcctcgcacagcctattttgcggagggcgaaaagctg
ccattgacccaggacgcccacaaaggtgaattggtggcgcgggtggcgtgcgatgaaatc
gtgccctacccgccgggtattccgttggtggtgcccggccaggagttgaccgcagatatt
ctgtccgccattgccaactatgtgtacgaacgcaaagatctggaaatgcacggggttcag
accatcaacggtgtaccccatatccgcgtgatgcgcaaagaagccgaagccgaaggcaaa
gcggagttgacccgactggccggacactga
DBGET
integrated database retrieval system