Simiduia agarivorans: M5M_12920
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Entry
M5M_12920 CDS
T02281
Name
(GenBank) OmpA domain-containing protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
saga
Simiduia agarivorans
Brite
KEGG Orthology (KO) [BR:
saga00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
saga02000
]
M5M_12920
Transporters [BR:
saga02000
]
Other transporters
Pores ion channels [TC:
1
]
M5M_12920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
OprF
TSP_3
OMP_b-brl
DUF4959
DUF748
DUF6802
Motif
Other DBs
NCBI-ProteinID:
AFU99736
UniProt:
K4KL55
LinkDB
All DBs
Position
2827800..2828642
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AA seq
280 aa
AA seq
DB search
MYHFNTEADIQPFVMAGVGYGHFKTDTASDRDEALNIGVGVKGYLTDNFLLRADTRAIRG
IADGDIDYALNLAATYLIGTGSSKPAPVAMAAAPSDADADGVVDTQDACPQTPAGVKVDS
RGCALDSDRDGVADYKDQCPNTEAGLKVDAKGCAIELTEAVEIKLHVRFDNNAAVVKPEY
KSEIGNVAKFMNSYANTTVEVQGFTDSRGSEAYNQNLSQRRADAVRSVLISEFGIAPERV
KAVGYGEANPVADNNTAEGREANRRVVASIESQKTSKVRK
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
ttgtatcacttcaatactgaagccgatatccaaccgtttgtaatggccggtgttggctat
ggtcactttaaaaccgataccgcctctgatcgtgacgaggcactcaatatcggtgtgggc
gttaaaggttacctgaccgataactttctgttacgtgccgatacccgtgccattcgtggc
attgccgatggcgatatcgattacgcgctcaacctggcagcaacctacctgatcggcacg
ggttcatccaagcctgcgcccgttgccatggcagccgctccttctgatgcggatgctgac
ggcgtggtggatactcaggatgcctgtccccagacaccagccggcgtcaaggtagacagc
cgtggttgcgcattggacagtgatcgcgacggcgttgccgactacaaagaccagtgccct
aataccgaagccggactgaaagtcgatgccaaaggttgtgcgatagaattgactgaagcg
gttgaaatcaaactgcatgttcgctttgacaataacgccgctgtggttaagccggagtac
aaatctgaaattggcaatgtggccaaattcatgaacagctacgccaatactactgtcgaa
gtgcagggctttaccgattcacgtggttcggaagcgtataaccagaatctgtcccagcgt
cgtgccgatgcggtgcgctctgtgttgatcagtgaatttggtatcgcgcctgagcgtgtg
aaagccgtaggttacggcgaagccaatcctgtggctgataacaacaccgctgaaggacgg
gaagcaaaccgtcgcgtagtggcttccatcgagtcccagaaaacctctaaagtacgcaaa
taa
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