Simiduia agarivorans: M5M_13525
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Entry
M5M_13525 CDS
T02281
Name
(GenBank) NUDIX family hydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
saga
Simiduia agarivorans
Pathway
saga03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
saga00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M5M_13525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
saga03019
]
M5M_13525
Messenger RNA biogenesis [BR:
saga03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
M5M_13525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
AFU99847
UniProt:
K4L103
LinkDB
All DBs
Position
2955114..2955611
Genome browser
AA seq
165 aa
AA seq
DB search
MIDSDGFRPNVGIIVTNDRGQVLWARRVGGQDAWQFPQGGINPDESVEQALYRELHEEVG
LTADQVEILGSTRGWLRYLLPKKLLRKNSSPVCIGQKQRWFLLRLKADDGAIDLHTQKKD
EFDHWRWVSYWYPLGKVVSFKRDVYRKALRELAPLQARHQRSQGV
NT seq
498 nt
NT seq
+upstream
nt +downstream
nt
ttgatagacagtgacggtttcagacccaatgtgggcatcattgtgaccaatgaccgtggc
caggtgctgtgggcgcgccgcgtgggcgggcaagacgcctggcaattcccgcagggcggt
atcaatcccgacgaatcggtcgagcaggcgctgtaccgcgaattgcatgaggaagtgggt
ctgactgccgatcaggtagaaatactgggctccacccgcggctggctgcgctacctgttg
ccgaaaaagctgctacgcaaaaactcctcgccggtatgcatcggtcagaagcaacgctgg
tttctgctgcgtctgaaggcagacgacggtgccatcgatctgcatacccagaaaaaagat
gaattcgatcattggcgttgggtgagttactggtacccgttgggtaaagtggtttcattc
aagcgcgatgtgtatcgcaaagccctgcgcgagctggcaccattgcaagcgcgtcaccag
cgctctcagggggtttaa
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