Simiduia agarivorans: M5M_16250
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Entry
M5M_16250 CDS
T02281
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
saga
Simiduia agarivorans
Pathway
saga00061
Fatty acid biosynthesis
saga00071
Fatty acid degradation
saga01100
Metabolic pathways
saga01212
Fatty acid metabolism
saga02024
Quorum sensing
saga04146
Peroxisome
Module
saga_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
saga00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
M5M_16250
00071 Fatty acid degradation
M5M_16250
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
M5M_16250
09145 Cellular community - prokaryotes
02024 Quorum sensing
M5M_16250
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
saga01004
]
M5M_16250
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
saga04147
]
M5M_16250
Enzymes [BR:
saga01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
M5M_16250
Lipid biosynthesis proteins [BR:
saga01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
M5M_16250
Exosome [BR:
saga04147
]
Exosomal proteins
Exosomal proteins of breast milk
M5M_16250
Exosomal proteins of breast cancer cells
M5M_16250
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AFV00383
UniProt:
K4L2G7
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All DBs
Position
3540229..3541851
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AA seq
540 aa
AA seq
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MKPVTELAPTPLEKFYQWERSAPDTIFLRQSAANQWIEYTWSDVAEMVRRVAGFLRARNL
PAGSRIGLLATNCAEWLVVDLAIMLAGHVSVPLYAAQDIRSGRYIFDHAGVSLVFVGHFA
HEQNPDTLLVEGIYRVALSDCVVPCDISLPEIFEHAERFEACPLYPREQLFTLIYTSGTT
GNPKGVMHSLGACAEVVQRRTQFLPSADPGARERFISYLPLAHVAERVGIAIRAVYGNAE
LSFSAGPERFAEEMREVRPTGFFAVPRLWEKFRQGLEAAMPGLDPHALSDAQKLAVRQRL
GLDQARIITTGAAATAPDIMAWYAALGIRLQNAYGMTENLIDGCIDMSESPADPGCVGKP
LPGVQLRFTEDGEVCFRSAGLMQGYYKEPDKTALVLHAGWYHTGDRGYLDAEGRLVLTGR
VGDIFKTAKGKFVNPLELEHKLTATGLFEQLCVVGQGLAQPVLIARPFSANCDIRISTVI
EQINTELAPHERIGQILLTDSLWSADNGLLTPTLKVRRQAVADRYLPELEPDVPLCWCKN
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgaagccggtgacagagttggcacccactccgctggaaaaattctatcagtgggaacgc
agcgcgccggatactatttttctgcgacagtcggcggcgaatcaatggatcgaatacacc
tggagcgacgtggcggaaatggtccgtcgtgttgccggctttctgcgcgctcgcaatttg
cccgcgggcagccggatcggcttgctggccaccaattgcgccgagtggctggtggtggat
ctcgcgatcatgttggcgggccatgtgagtgtgccattgtatgccgcacaggacatccga
tcagggcgttatatttttgaccatgcgggtgtgtcactggtgtttgtcggccactttgcg
catgagcagaatccggataccctgttggtggaaggtatctatcgcgtggccctgtccgac
tgtgtggtgccatgtgatatctctcttccggaaatctttgaacacgccgagcgatttgag
gcctgtccgctatacccgcgcgagcaattgtttacgctcatttatacgtcgggcacgacc
ggtaatcccaagggcgttatgcacagtctgggcgcctgtgccgaagtggtgcaacgacgc
acgcaatttctgccatcggcggacccaggcgcacgcgaacgttttatctcttacctgccg
ctggcgcatgtggccgagcgcgttggcatcgccatccgcgcggtctacggcaatgcggaa
ctttccttcagcgccggacccgaacgcttcgccgaagaaatgcgcgaagtcaggcccact
ggtttctttgccgtgcctcgtctgtgggaaaaattccgacaggggttggaagctgccatg
ccgggattggatccccatgccttgtcggacgcacaaaaactggcggtgcggcaacggctg
ggactggatcaggcgcgcatcattaccaccggtgccgcggcgacagcgccggacatcatg
gcctggtatgccgcgctcggtatccgtttacagaatgcttatggcatgaccgaaaacctg
atcgatggctgtatcgatatgagtgagtcgccagcggacccgggctgcgtgggtaagccg
ttgcccggcgtacagctccggtttaccgaggatggcgaagtctgcttcagaagtgccggc
ctgatgcaaggctattacaaagagccggataaaaccgcactggtgttgcacgccggctgg
tatcacaccggtgatcgcggctatctggatgcggagggacggttggtgttgaccggtcgc
gtgggcgacattttcaaaaccgccaagggcaagttcgtcaatccgttggaactggaacat
aaactcactgccaccggtttatttgagcagctgtgcgtggtggggcaggggctggcgcag
ccggtactgattgcccgcccctttagcgccaattgcgacatccggatcagtaccgtcatc
gaacagatcaatactgagctggcgccacacgaacgtattggccagatactgttgacggat
agcctctggagtgctgacaacggcctgctgacacctacattaaaagtccgccgtcaggct
gtggcggatcggtatctgccggaacttgagccagatgtgccattgtgttggtgtaaaaac
taa
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