Simiduia agarivorans: M5M_16905
Help
Entry
M5M_16905 CDS
T02281
Name
(GenBank) 3-dehydroquinate synthase
KO
K02014
iron complex outermembrane recepter protein
Organism
saga
Simiduia agarivorans
Brite
KEGG Orthology (KO) [BR:
saga00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
saga02000
]
M5M_16905
Transporters [BR:
saga02000
]
Other transporters
Pores ion channels [TC:
1
]
M5M_16905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec
Plug
Motif
Other DBs
NCBI-ProteinID:
AFV00512
UniProt:
K4KN92
LinkDB
All DBs
Position
3716877..3720377
Genome browser
AA seq
1166 aa
AA seq
DB search
MSRLNTRFRLSALSAAVIAATSMSVYAQDDASIEEAEQLEEIQVYGIRRSIEKSVDDKRF
ATNIKDTINAEDIGKSTDQNIAEALSRVTGVSAQTRDGEGTTITVRGANAQQNNISLNGV
PLGATDFSQAVDLSAYSSDILSKIEVVKTPSADHEEGALGANVNLVTVRPLDSDEALNIT
IQGRQNDLSDNRDYKLSFSGSQKFLDDTLGVALTVFDETNSVRKDEYSRSDFRAYHVDVA
RDQNGNVVNDVWGVAPNFTEYSLNQNEYRRQGVNLGVQWMATDTTEVMLNASHNVQDISN
TLDQIKVGIGQVGNMVGGIVEGVNESAPSDPSWTDPQEDWYVIDSNTNTFTKNLSRNASG
QFNASLNEFENINDIVSLEIKQDIGDSIVVSGGINYSKAEQKPGESYWTNLQNYGRISAK
QVALTSPDDIEPVGYDCSSGRCVIVSGTGLVDFGTIVPPDAEHITDNRSTTLFNPQDYDA
FHLGYQSKNDVRVEDTQKSAYVDLDWDVEVAGLTKIEAGFKYSQREKAVDNQLYTFNSVA
DGVVVLDPNGNPVALPNGLLDIDASFVNEGKFPVDDFMKTLGYADGAHSAWTTIDPQQAF
AVAQGDGELAIVRDDTETRNTKLDNFAVYIKGNFAFLDDKLTGDVGVRYVRTTVESAGYS
GANFYGDVNNTGIIMDPFKIQALRDQSNPACPAWGSYLYTDSTDPGYSPWNQGVRWERID
GNGFDTKGTADYSDDTALPAVDGPCYDWTTEQDFGWGDGSGFSGWWNWRHSDISTDARYV
YFQTEDGKRVLDENGNLYWEDRSRRSFAVEDKHDYGMLLPSLNLNYLLTDDLIGRFAVSK
TMARPQIDSLRPGFKFEEDVWTRNNTITMTNTKLDPLTSNNLDLSLEWYFSEGSLLAGGV
FYKDMTNFEESQTILTYSDDLRDLGLDPNAPAYNPADLVKPVGSDLAGCFPKRMHDSWGI
GDWFFSGDPEQMCAMFQTTTIKNGKGASIKGLELQYVQTFDMLPGFLSGLGTQLNYTYQS
SEYDQEVSSIDPSVVVPALPVAYTPEHSYNATVFWERNGHQVRLAYQGQTDQLAQRSWGA
GALWQEARATLDLSATYQLTDTIALSFNAVNLTDAPVRTYFTSRFLNLGGEILDEGSPLS
DGATDSRTVSEYKTGRSYRLGISARF
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgattaaacacccggttccggttgtctgccttgtctgcggcagtgattgctgcc
accagcatgagcgtttatgcccaggatgatgccagcattgaagaagctgagcagctggaa
gaaattcaggtttatggtatccgccgcagcattgaaaaatctgttgatgacaagcgtttt
gccaccaacatcaaagacaccatcaacgccgaagatataggtaagtctaccgaccagaat
attgccgaagccctgtcccgggtgacgggcgtttccgcgcaaacacgtgatggcgaaggg
accaccattaccgtacgcggtgccaatgcgcagcagaacaatatcagcctgaacggcgtt
ccattgggcgccaccgacttcagccaggcggtagacctttcggcttactcatccgatatc
ctgtcaaaaattgaagtggtcaaaacgccctctgccgatcatgaggaaggagcgttgggt
gcaaacgtaaatctggttactgttcggccattggactcagatgaggcgctgaacattacc
attcaggggcgtcagaatgatctgtctgataatcgtgattataagctctctttttctggc
tctcagaagtttctggacgatacgctgggtgttgcattaaccgtctttgacgaaaccaat
agcgttcgaaaagatgagtacagccgctcagacttccgtgcttatcacgtggatgtggca
cgagatcagaatggcaatgtggtgaacgatgtctggggtgtggcacccaattttaccgaa
tattcactgaatcagaatgaatatcgccgccagggtgtaaatctgggggtgcagtggatg
gcaacggatactactgaagtgatgttgaacgcaagccacaatgttcaggatatcagcaat
acgctggatcagatcaaggtgggtattggtcaggtgggcaacatggtgggcggtatcgtg
gagggcgtaaatgaatctgcgccgtcagaccccagttggaccgacccccaagaagattgg
tatgtcatagattccaataccaatacctttaccaagaatcttagccgtaacgcctccggc
cagttcaatgcgtcattgaatgaatttgaaaacatcaatgacattgtctctttggaaatt
aagcaggacataggcgattccattgtggtttcaggcggtattaactattcgaaggcagag
cagaaacccggtgaatcctattggaccaatctgcagaactacggtcgaatttccgccaag
caggtagcattgacctctccagacgatattgaacccgtgggctacgattgttcttccggc
cgctgtgtaattgtcagtggcaccggcttggtagactttggaactattgttcctcccgat
gctgagcacattaccgacaatcgttcaaccacattatttaatccacaggactatgatgct
tttcatttaggctatcaatccaagaatgacgtgcgtgtggaggatactcagaagtccgca
tacgtcgacctggattgggatgtggaagtggcagggttgactaaaattgaggctggattt
aaatactctcagcgtgaaaaagcagttgataaccagctctacacgtttaacagtgtggct
gatggcgttgttgtattggacccaaatggaaacccggttgcactgcctaatgggttgctg
gatattgacgcctcattcgtcaatgaagggaagtttcccgttgatgattttatgaaaacg
ctgggctacgcagacggtgctcatagcgcttggactaccatcgaccctcagcaggcattt
gcagtagcgcagggcgacggtgaactggcaattgtacgggacgatacagaaacacgtaac
accaagctcgataattttgcagtctatataaagggtaactttgcattccttgatgacaag
ctgactggtgatgtgggcgttcgctatgtccgtacaactgttgagtcagcgggttactca
ggtgccaatttttacggtgacgtaaataataccggcatcatcatggatccttttaaaatt
caggccttacgtgaccaaagtaatcccgcctgccctgcgtggggttcgtacctctacacc
gattccaccgatccgggctactcgccctggaaccaaggtgtgcgctgggagcgtattgac
ggtaatggctttgacaccaagggcacggcagattattccgacgacaccgcactacctgcg
gtagatggcccttgttacgactggaccaccgaacaggactttggctggggagatggatca
ggtttctccggctggtggaactggcgtcactccgatatatctaccgatgcccgctacgtt
tattttcaaactgaagatggtaagcgggtattggatgagaatggcaacctctactgggaa
gatcgttccagacgctcattcgccgttgaagacaaacatgattatggcatgttgttgccc
agcctgaacctgaactacctgctgacggatgatttaatcggtcgctttgcggttagtaaa
accatggcgcgcccacaaattgatagcctgcgtccgggattcaagtttgaagaagatgtg
tggacacgcaataacacgattaccatgaccaataccaagttggatccactaacatcgaac
aacctggatctgtcactggagtggtacttttcggagggatcgttactggcgggcggcgtt
ttctataaggacatgaccaattttgaagagtcgcaaacgatccttacctactctgacgat
ctacgtgatctgggccttgatccgaatgcaccagcgtacaaccctgcggatctggttaaa
cctgttggatcagacctggccggctgtttccccaagcgcatgcatgatagctggggcatt
ggcgactggttcttctccggtgatcctgagcagatgtgtgcgatgttccagaccaccact
attaaaaatggtaagggcgcaagtattaaaggacttgaacttcagtatgttcagaccttc
gacatgttgccaggattcctgtccggtttgggtacacagttgaactacacctatcagtcg
agtgagtatgatcaggaagtgtccagtattgatccgagcgtggtagtacctgcattgccc
gtggcctatacgccagagcacagctataacgccacggtattctgggagcgcaatggacat
caggttcgcctggcctatcaggggcaaaccgaccagttggcgcaacgttcctggggtgcg
ggtgcactttggcaggaagcccgggctacattggatttgtcggcaacctatcagttgacc
gataccatcgctctgagctttaacgcagtgaacctgacagacgcaccggttcgtacctac
tttaccagccgattcctcaatcttggtggtgaaatactggatgaaggtagcccattgtct
gacggcgctaccgactcccgtacggtatcggagtacaaaaccggccgcagctatcgactg
ggtatctctgcacgtttctga
DBGET
integrated database retrieval system
