Simiduia agarivorans: M5M_16950
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Entry
M5M_16950 CDS
T02281
Name
(GenBank) mandelate racemase/muconate lactonizing-like protein
KO
K01684
galactonate dehydratase [EC:
4.2.1.6
]
Organism
saga
Simiduia agarivorans
Pathway
saga00052
Galactose metabolism
saga01100
Metabolic pathways
saga01120
Microbial metabolism in diverse environments
Module
saga_M00552
D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P
Brite
KEGG Orthology (KO) [BR:
saga00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
M5M_16950
Enzymes [BR:
saga01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.6 galactonate dehydratase
M5M_16950
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Gene cluster
GFIT
Motif
Pfam:
MR_MLE_C
MR_MLE_N
Motif
Other DBs
NCBI-ProteinID:
AFV00521
UniProt:
K4KQH6
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All DBs
Position
3731707..3732861
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AA seq
384 aa
AA seq
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MKISDIKCYPAWVGHRNLCLVKVETDEGVYGWGESGLSSRELAVAGAVKHFREFLIGKDA
RHIGSLWQEMYRSQYFEGGRVLTAAISAIDIALWDIAGKALGVPVHQLLGGQQRTEIPLF
VTSTKAFGEEFLADCKRLADAGYQVIRATTGEHGSPVKPTTFDVRKSIALASGCLTELRQ
ELGHDKVLGIDYHHRLTVAEAASFCQKMPVGTLDFIEEPIRDQTPSAYAALRSMTDVPFA
IGEEFASKWDFAPYLESGLNQFARIDVCNVGGLTEAMKVAAMAETHYIDVMPHDPLGPVC
TAATIQMCAAIPNLSWCEVAPYDTDKSDHDRFFINRPIETKGVYRVSQAPGLGVDVNEDL
LAEQSFKFWEAPRLYKPDGSYTNW
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgaagatttctgacattaagtgttaccccgcctgggtggggcatcgcaatctgtgcctg
gtgaaggtggaaaccgatgagggtgtttatggttggggtgagtcgggcttgtccagccgt
gaactcgcagtggccggtgcggtaaaacatttccgcgaatttctgatcggcaaagatgcc
cgccatattggttcgctctggcaggaaatgtatcgcagtcagtattttgaaggcgggcgg
gtgctcaccgctgctatttctgccatcgatatcgccctgtgggatattgccggtaaagcc
ctgggcgtgccggtacaccagttgttgggcggccaacagagaacagaaattccattgttc
gtgacctccaccaaggccttcggtgaggaatttctcgcagactgtaagcgcctggccgat
gccggctatcaggtgattcgtgccaccaccggtgagcatggcagcccggtaaaacccacg
acctttgatgtgcgtaaatccattgctctggcctcgggctgcctcactgaattgcgccag
gaattaggtcatgacaaggtgttgggcattgattatcaccaccgtctgaccgtggcggaa
gccgcgagcttttgccagaagatgccggtgggcacgctcgactttattgaagagcccatc
cgcgatcagaccccgtcggcctatgcggccttgcgttctatgacggatgtgcccttcgcc
attggcgaagagtttgcgagtaaatgggattttgccccttatctcgaatccggcctgaat
cagtttgcccgcatcgatgtgtgcaacgtgggcggtctgaccgaggccatgaaggtggcg
gcgatggccgaaacccattacatcgatgtgatgccacatgatccgctgggccctgtatgt
accgcagccaccatccagatgtgcgccgccatacccaatttgtcctggtgtgaagtcgcg
ccctatgacaccgataagtccgatcacgaccgcttctttattaaccggcccatcgagacc
aaaggcgtttaccgcgtgagccaggcgccgggcctgggggtggatgtgaatgaagacctg
ttggccgagcaaagctttaagttctgggaagctccccgcctctacaagccggatggatcc
tataccaactggtag
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