Simiduia agarivorans: M5M_17185
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Entry
M5M_17185 CDS
T02281
Symbol
carB
Name
(GenBank) carbamoyl phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
saga
Simiduia agarivorans
Pathway
saga00240
Pyrimidine metabolism
saga00250
Alanine, aspartate and glutamate metabolism
saga01100
Metabolic pathways
saga01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
saga00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
M5M_17185 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
M5M_17185 (carB)
Enzymes [BR:
saga01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
M5M_17185 (carB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
ATPgrasp_Ter
ATP-grasp_4
GARS_A
CoA_binding_2
Xre-like-HTH
HTH_23
Usp
Motif
Other DBs
NCBI-ProteinID:
AFV00568
UniProt:
K4L2Z3
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All DBs
Position
3786130..3789351
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AA seq
1073 aa
AA seq
DB search
MPKRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAM
ADATYIEPIEWQTVAAIIEKERPDAVLPTMGGQTALNCALALHKHGVLEKFGVELIGANE
EAIEKAEDRELFDQAMKKIGLECARAKIVHTMEEAKEVPKEFGFPCIIRPSFTMGGSGGG
IAYNWEEFEEICARGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDPM
GVHTGDSITVAPAQTLTDKEYQIMRNASVAVLREIGVETGGSNVQFAVDPKTGRLVVIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELQNDITGGATPASFEPSIDYVVTKIP
RFTFEKFGEADARLTTQMKSVGEVMAIGRTFQESVQKALRGLEVGSAGFEPIVDLNEPDA
MTLIRRDLTTPGAKRIWYVADAFRAGLSVDDVFNLSAIDPWFLVQIKDIVDTELSLASVT
MSSLDAEKMFALKRKGFSDKRLAKLLGVTEKTFRKHRQGLNIRPVYKRVDTCAAEFSTST
AYMYSTYEEECEANPSGRDKILVLGGGPNRIGQGIEFDYCCVHAALAMRDDGYETIMVNC
NPETVSTDYDTSDRLFFEPVTLEDVLEIVELEKPKGVIVQFGGQTPLKLARALEEAGVPI
IGTSSDAIDRAEDRERFQQMVIRLGLKQPANAIVRSTEEALRSAEGVGYPLVVRPSYVLG
GRAMEIVYNESELKTYMREAVQASEDAPVLLDHFLNNAIEVDIDAVSDGKDVVIGAIMQH
IEQCGVHSGDSACSLPPYSLDKDVQNEMREQVRKMAIELGVIGLMNVQLAYQDGEIYVIE
VNPRASRTVPFVSKCIGVSLAKVAARCQAGMSLADQGFTREIVPSYYSVKEAVFPFNKFP
SVDPILGPEMRSTGEVMGVGDTFAEAFAKAQLGAGDVLPTKGKAFISVRDFDKDSMITVA
KELADLGFELCATRGTAAVIEAAGLTVQTVNKVNEGRPHIVDMIKNDEIDLIINTTEGKQ
AIKDSASIRRGAEGHRVYYTTTLAAAEALCVAIRFGLKTEVRRLQDLHKRIIA
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaaagaactgacattaaaagcatcctgattatcggtgccggccccatcgtgatt
ggccaggcctgtgaattcgactactccggcgctcaggcttgtaaagccctgcgcgaagag
ggttaccgggttatcctggtgaactccaacccggccaccatcatgaccgatccggccatg
gcggacgccacctacatcgagcccatcgagtggcagacggttgcggcgatcatcgaaaaa
gagcgtcccgatgcggtgctgcccactatgggtggccagacagcgcttaactgtgcgttg
gcgttgcacaagcacggtgtgctggaaaagttcggcgttgaattgatcggtgccaacgaa
gaggcgatcgaaaaagccgaagaccgcgaactgtttgaccaggccatgaaaaaaatcggc
ctggagtgcgcacgcgccaagatcgttcacaccatggaagaagccaaggaagtgccgaaa
gaatttggctttccgtgcatcatccgcccgtcgttcaccatgggtggctctggtggtggt
atcgcctacaactgggaagagtttgaagaaatctgtgcccgcggcctggatctctcgccc
actaatgagctgttgattgatgaatcgctcatcggttggaaagagtacgaaatggaagtg
gtgcgcgacaaaaacgataactgcattatcgtgtgctcgatcgaaaactttgatcccatg
ggtgtgcataccggcgattccatcaccgtggcaccggcgcaaaccctgaccgacaaagaa
taccagatcatgcgtaacgcctcggtggcggtattgcgcgagatcggtgtggaaaccggc
ggctccaacgtgcaatttgcggtggacccgaaaaccggtcgcctggtggtgattgagatg
aacccgcgcgtgtcgcgctcatccgcgcttgcctccaaagccaccggtttccccatcgcc
aaggtggcggcgaaactggccgtgggttacacgctggacgaattgcaaaacgacatcacc
ggtggtgccaccccggcgtcgttcgaaccgtctatcgactatgtggttaccaaaattccg
cgctttaccttcgagaaattcggcgaagccgatgcgcgtctgaccacgcaaatgaaatcc
gtgggcgaagtgatggccatcggccgcacctttcaggaatcggttcaaaaggcactgcgc
ggtctggaagtgggctcggccggttttgagcctatcgtcgatctgaatgaacccgatgcc
atgaccctgattcgtcgcgatctcaccacgcccggtgccaagcgcatctggtacgtggcc
gatgcgttccgcgccggactgagcgtagacgacgtatttaatctgtcggccatcgaccct
tggttcctggtgcagatcaaagacattgtggataccgaattgagcctggcgtctgtgaca
atgtcgtcactggacgcggaaaaaatgttcgcgctcaagcgcaaagggttttccgacaag
cgcctggccaaactgttgggcgttaccgagaaaactttccgcaaacaccgtcaggggctg
aatatccgcccggtgtacaagcgggtggatacttgtgcggccgagttctctacatccact
gcttacatgtactcaacctacgaggaagagtgcgaagcgaatccgtcagggcgcgataaa
attctggttttgggtggcggcccgaaccgcattgggcagggtattgaattcgattactgc
tgtgtgcacgcggcgctggccatgcgcgatgacggttacgaaaccatcatggtcaactgt
aacccggaaaccgtgtccaccgattacgacaccagtgatcgcctgttcttcgagcccgtg
acactggaagatgtgctggaaatcgttgaactggaaaaacccaaaggcgtgatcgtgcaa
ttcggtggccagacgccgctgaaactggcgcgcgcgctggaagaggccggtgtgccgatt
atcggcaccagcagtgacgccatcgaccgcgccgaagaccgtgagcggttccagcagatg
gtgattcgtttaggccttaagcagcccgccaacgccattgtgcgctccaccgaagaagcg
ttgcgttcggctgaaggggtgggctatccattggtggttcgcccttcctacgtgctgggt
ggtcgcgccatggaaatcgtctacaacgaatccgaactgaaaacctacatgcgcgaagcg
gtgcaagcctctgaagatgcgccggtattgctggatcacttcctgaataacgccatcgag
gtggatatcgacgcagtatccgacggcaaggatgtggtgatcggtgcgatcatgcagcac
attgaacaatgtggtgtgcactcgggtgactccgcttgttcactgccgccttactcgctg
gataaggatgtgcagaatgagatgcgcgagcaggtacgcaaaatggccatcgagctgggt
gtgatcggcttgatgaacgtgcagctggcgtatcaggacggcgagatttacgtcatcgaa
gtgaaccctcgtgcgtcgcgcacggtgccgttcgtgtccaagtgcatcggcgtgtctctg
gccaaagtggccgcgcgctgccaggcgggtatgtcgctggctgatcagggcttcacccgc
gaaatcgtaccgagctattacagcgttaaagaagcggtgtttccgtttaataaattccct
tcagtggatccgattcttggtccggaaatgcgctccaccggtgaggtgatgggtgtaggt
gataccttcgccgaagcctttgccaaagcccagttgggtgcaggcgacgtgttgcccacc
aagggtaaagcgtttatctctgtgcgtgactttgacaaggattccatgatcaccgtagcc
aaagagttggctgatcttggctttgaattgtgcgccacccgtggcaccgccgccgtgatt
gaggctgcgggtttaaccgtgcaaaccgtcaataaagtcaatgagggacggcctcatatt
gtcgatatgatcaagaacgatgaaatcgatctgatcatcaataccactgaaggtaagcag
gcgatcaaggattcagcctcgatccgccgtggtgcagaaggtcatcgggtctattacacc
accaccctggctgcggccgaggcattgtgtgttgccattcgctttggtctgaagacagaa
gtccgtcgcctgcaggatttgcataagaggatcattgcatga
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