Simiduia agarivorans: M5M_17185
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Entry
M5M_17185 CDS
T02281
Symbol
carB
Name
(GenBank) carbamoyl phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
saga
Simiduia agarivorans
Pathway
saga00220
Arginine biosynthesis
saga00240
Pyrimidine metabolism
saga00250
Alanine, aspartate and glutamate metabolism
saga01100
Metabolic pathways
saga01110
Biosynthesis of secondary metabolites
saga01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
saga00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
M5M_17185 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
M5M_17185 (carB)
00220 Arginine biosynthesis
M5M_17185 (carB)
Enzymes [BR:
saga01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
M5M_17185 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
ATPgrasp_Ter
ATP-grasp_4
GARS_A
CoA_binding_2
Xre-like-HTH
HTH_23
Usp
Motif
Other DBs
NCBI-ProteinID:
AFV00568
UniProt:
K4L2Z3
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All DBs
Position
3786130..3789351
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AA seq
1073 aa
AA seq
DB search
MPKRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAM
ADATYIEPIEWQTVAAIIEKERPDAVLPTMGGQTALNCALALHKHGVLEKFGVELIGANE
EAIEKAEDRELFDQAMKKIGLECARAKIVHTMEEAKEVPKEFGFPCIIRPSFTMGGSGGG
IAYNWEEFEEICARGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDPM
GVHTGDSITVAPAQTLTDKEYQIMRNASVAVLREIGVETGGSNVQFAVDPKTGRLVVIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELQNDITGGATPASFEPSIDYVVTKIP
RFTFEKFGEADARLTTQMKSVGEVMAIGRTFQESVQKALRGLEVGSAGFEPIVDLNEPDA
MTLIRRDLTTPGAKRIWYVADAFRAGLSVDDVFNLSAIDPWFLVQIKDIVDTELSLASVT
MSSLDAEKMFALKRKGFSDKRLAKLLGVTEKTFRKHRQGLNIRPVYKRVDTCAAEFSTST
AYMYSTYEEECEANPSGRDKILVLGGGPNRIGQGIEFDYCCVHAALAMRDDGYETIMVNC
NPETVSTDYDTSDRLFFEPVTLEDVLEIVELEKPKGVIVQFGGQTPLKLARALEEAGVPI
IGTSSDAIDRAEDRERFQQMVIRLGLKQPANAIVRSTEEALRSAEGVGYPLVVRPSYVLG
GRAMEIVYNESELKTYMREAVQASEDAPVLLDHFLNNAIEVDIDAVSDGKDVVIGAIMQH
IEQCGVHSGDSACSLPPYSLDKDVQNEMREQVRKMAIELGVIGLMNVQLAYQDGEIYVIE
VNPRASRTVPFVSKCIGVSLAKVAARCQAGMSLADQGFTREIVPSYYSVKEAVFPFNKFP
SVDPILGPEMRSTGEVMGVGDTFAEAFAKAQLGAGDVLPTKGKAFISVRDFDKDSMITVA
KELADLGFELCATRGTAAVIEAAGLTVQTVNKVNEGRPHIVDMIKNDEIDLIINTTEGKQ
AIKDSASIRRGAEGHRVYYTTTLAAAEALCVAIRFGLKTEVRRLQDLHKRIIA
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaaagaactgacattaaaagcatcctgattatcggtgccggccccatcgtgatt
ggccaggcctgtgaattcgactactccggcgctcaggcttgtaaagccctgcgcgaagag
ggttaccgggttatcctggtgaactccaacccggccaccatcatgaccgatccggccatg
gcggacgccacctacatcgagcccatcgagtggcagacggttgcggcgatcatcgaaaaa
gagcgtcccgatgcggtgctgcccactatgggtggccagacagcgcttaactgtgcgttg
gcgttgcacaagcacggtgtgctggaaaagttcggcgttgaattgatcggtgccaacgaa
gaggcgatcgaaaaagccgaagaccgcgaactgtttgaccaggccatgaaaaaaatcggc
ctggagtgcgcacgcgccaagatcgttcacaccatggaagaagccaaggaagtgccgaaa
gaatttggctttccgtgcatcatccgcccgtcgttcaccatgggtggctctggtggtggt
atcgcctacaactgggaagagtttgaagaaatctgtgcccgcggcctggatctctcgccc
actaatgagctgttgattgatgaatcgctcatcggttggaaagagtacgaaatggaagtg
gtgcgcgacaaaaacgataactgcattatcgtgtgctcgatcgaaaactttgatcccatg
ggtgtgcataccggcgattccatcaccgtggcaccggcgcaaaccctgaccgacaaagaa
taccagatcatgcgtaacgcctcggtggcggtattgcgcgagatcggtgtggaaaccggc
ggctccaacgtgcaatttgcggtggacccgaaaaccggtcgcctggtggtgattgagatg
aacccgcgcgtgtcgcgctcatccgcgcttgcctccaaagccaccggtttccccatcgcc
aaggtggcggcgaaactggccgtgggttacacgctggacgaattgcaaaacgacatcacc
ggtggtgccaccccggcgtcgttcgaaccgtctatcgactatgtggttaccaaaattccg
cgctttaccttcgagaaattcggcgaagccgatgcgcgtctgaccacgcaaatgaaatcc
gtgggcgaagtgatggccatcggccgcacctttcaggaatcggttcaaaaggcactgcgc
ggtctggaagtgggctcggccggttttgagcctatcgtcgatctgaatgaacccgatgcc
atgaccctgattcgtcgcgatctcaccacgcccggtgccaagcgcatctggtacgtggcc
gatgcgttccgcgccggactgagcgtagacgacgtatttaatctgtcggccatcgaccct
tggttcctggtgcagatcaaagacattgtggataccgaattgagcctggcgtctgtgaca
atgtcgtcactggacgcggaaaaaatgttcgcgctcaagcgcaaagggttttccgacaag
cgcctggccaaactgttgggcgttaccgagaaaactttccgcaaacaccgtcaggggctg
aatatccgcccggtgtacaagcgggtggatacttgtgcggccgagttctctacatccact
gcttacatgtactcaacctacgaggaagagtgcgaagcgaatccgtcagggcgcgataaa
attctggttttgggtggcggcccgaaccgcattgggcagggtattgaattcgattactgc
tgtgtgcacgcggcgctggccatgcgcgatgacggttacgaaaccatcatggtcaactgt
aacccggaaaccgtgtccaccgattacgacaccagtgatcgcctgttcttcgagcccgtg
acactggaagatgtgctggaaatcgttgaactggaaaaacccaaaggcgtgatcgtgcaa
ttcggtggccagacgccgctgaaactggcgcgcgcgctggaagaggccggtgtgccgatt
atcggcaccagcagtgacgccatcgaccgcgccgaagaccgtgagcggttccagcagatg
gtgattcgtttaggccttaagcagcccgccaacgccattgtgcgctccaccgaagaagcg
ttgcgttcggctgaaggggtgggctatccattggtggttcgcccttcctacgtgctgggt
ggtcgcgccatggaaatcgtctacaacgaatccgaactgaaaacctacatgcgcgaagcg
gtgcaagcctctgaagatgcgccggtattgctggatcacttcctgaataacgccatcgag
gtggatatcgacgcagtatccgacggcaaggatgtggtgatcggtgcgatcatgcagcac
attgaacaatgtggtgtgcactcgggtgactccgcttgttcactgccgccttactcgctg
gataaggatgtgcagaatgagatgcgcgagcaggtacgcaaaatggccatcgagctgggt
gtgatcggcttgatgaacgtgcagctggcgtatcaggacggcgagatttacgtcatcgaa
gtgaaccctcgtgcgtcgcgcacggtgccgttcgtgtccaagtgcatcggcgtgtctctg
gccaaagtggccgcgcgctgccaggcgggtatgtcgctggctgatcagggcttcacccgc
gaaatcgtaccgagctattacagcgttaaagaagcggtgtttccgtttaataaattccct
tcagtggatccgattcttggtccggaaatgcgctccaccggtgaggtgatgggtgtaggt
gataccttcgccgaagcctttgccaaagcccagttgggtgcaggcgacgtgttgcccacc
aagggtaaagcgtttatctctgtgcgtgactttgacaaggattccatgatcaccgtagcc
aaagagttggctgatcttggctttgaattgtgcgccacccgtggcaccgccgccgtgatt
gaggctgcgggtttaaccgtgcaaaccgtcaataaagtcaatgagggacggcctcatatt
gtcgatatgatcaagaacgatgaaatcgatctgatcatcaataccactgaaggtaagcag
gcgatcaaggattcagcctcgatccgccgtggtgcagaaggtcatcgggtctattacacc
accaccctggctgcggccgaggcattgtgtgttgccattcgctttggtctgaagacagaa
gtccgtcgcctgcaggatttgcataagaggatcattgcatga
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