Simiduia agarivorans: M5M_17475
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Entry
M5M_17475 CDS
T02281
Symbol
gatB
Name
(GenBank) aspartyl/glutamyl-tRNA amidotransferase subunit B
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
saga
Simiduia agarivorans
Pathway
saga00970
Aminoacyl-tRNA biosynthesis
saga01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
saga00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
M5M_17475 (gatB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
saga03029
]
M5M_17475 (gatB)
Enzymes [BR:
saga01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
M5M_17475 (gatB)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
M5M_17475 (gatB)
Mitochondrial biogenesis [BR:
saga03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
M5M_17475 (gatB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
Pesticin_RB
Motif
Other DBs
NCBI-ProteinID:
AFV00624
UniProt:
K4KR58
LinkDB
All DBs
Position
complement(3854869..3856320)
Genome browser
AA seq
483 aa
AA seq
DB search
MQWETVIGLEVHVQLATNSKIFSGSSTAFGAEPNTQASLIDLAMPGTLPVANAQAFRYAT
MFGLAIDAEIGKHSVFERKNYFYPDLPKGYQTTQLDAPIVGAGHVDVTLADGRTKRVRIH
HAHLEEDAGKSLHEDFHGMSGIDLNRAGTPLIEIVSEPDMRNAEEAVAFAKKLHSIVTSL
GICDGEMSQGSMRFDVNISVRPLGEEKLGTRTETKNLNSFRFMEEAIKLEVERQIDLIED
GGTVIQETRLYNGERKESRSMRSKEEANDYRYFPCPDLLPVVIDDAYIDDVRKAMPELPD
ARHARFVETYQLSDYDAGQLSDNIDTARFFEATVAVAKDAKLSANWIMGELAARLNAEDK
TLRQSPVSAEQLGGMIARIKDGTISSKQAKEVFDGLWAGEGDADSIIEARGLKQVSDTGA
LEAMADDVIAASPKQVENYKNADEDKRPKMLGYFVGQIMKASKGQANPQAINEILLKKLN
ELL
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgggaaacagtgattggcctggaagtgcacgtgcaactggccaccaacagtaaa
attttttccggctcttctaccgccttcggcgccgagcccaacacccaggcatcgctcatc
gatctggccatgcccggcaccctgccggtggccaacgcccaggcgttccgctacgccacc
atgttcggcctggcgattgacgcggaaattggcaaacactcggtgttcgagcgcaaaaac
tatttctaccccgacctgcccaagggctaccagaccacccagctggacgcccccattgtg
ggcgccggccacgtggacgtgaccctggccgatgggcggaccaagcgggtacggattcac
cacgcacacctggaggaagatgcaggcaagtccttacacgaggacttccatggcatgagc
ggtatcgacctgaaccgggccggcacgccgctgattgaaatcgtgtccgaacccgatatg
cgcaatgcagaggaagcggtggcctttgccaaaaagctgcactccattgtcacctcactc
ggcatttgcgatggcgaaatgagccagggctccatgcgctttgacgtgaacatttccgtg
cgccccttaggtgaggaaaaactcggcacccgtaccgaaaccaaaaacctgaactctttc
cgctttatggaggaagccatcaagctggaagtggaacgccagatcgacctgatcgaagac
ggcggcacagtgattcaggaaacccgcctgtacaatggcgaacgcaaagaatcccgctcc
atgcgctcgaaggaagaagccaacgattaccgttacttcccctgccccgacctgctgcca
gtggtgattgacgacgcctatatcgacgatgtgcgcaaggccatgccggagctgccggac
gcacgccatgcccgctttgttgagacgtatcagctgtccgactatgacgccggccaattg
tcagacaacatcgacaccgcgcgcttttttgaggccactgtggcagtggccaaggatgcc
aagctttcagccaactggatcatgggtgaacttgccgcgcgcctgaatgcagaagataaa
accctgcgccagagcccggtcagcgcagagcaattgggcggcatgattgcccgcatcaaa
gacggcaccatctcaagcaagcaagccaaagaggtattcgacggtttgtgggcaggcgaa
ggtgatgctgacagtatcattgaagcgcgcggactcaagcaggtgtccgacaccggtgca
ctggaagccatggccgatgacgtcatcgctgccagccccaagcaagtggaaaactataaa
aacgccgacgaggacaagcggccgaaaatgctcggctactttgtgggccagatcatgaag
gcctccaaaggtcaggccaacccgcaggccatcaacgagattctgttaaagaagctcaac
gaattgctgtaa
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