Simiduia agarivorans: M5M_17995
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Entry
M5M_17995 CDS
T02281
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
saga
Simiduia agarivorans
Pathway
saga03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
saga00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M5M_17995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
saga03019
]
M5M_17995
03110 Chaperones and folding catalysts [BR:
saga03110
]
M5M_17995
03029 Mitochondrial biogenesis [BR:
saga03029
]
M5M_17995
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
saga04147
]
M5M_17995
Enzymes [BR:
saga01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
M5M_17995
Messenger RNA biogenesis [BR:
saga03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
M5M_17995
Chaperones and folding catalysts [BR:
saga03110
]
Heat shock proteins
HSP60 / Chaperonin
M5M_17995
Mitochondrial biogenesis [BR:
saga03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
M5M_17995
Exosome [BR:
saga04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
M5M_17995
Exosomal proteins of other body fluids (saliva and urine)
M5M_17995
Exosomal proteins of breast cancer cells
M5M_17995
Exosomal proteins of colorectal cancer cells
M5M_17995
Exosomal proteins of bladder cancer cells
M5M_17995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AFV00728
UniProt:
K4L3G9
LinkDB
All DBs
Position
3961809..3963449
Genome browser
AA seq
546 aa
AA seq
DB search
MAAKDVKFGNEARQKMLKGVNILADAVKTTLGPKGRNVVLDKSFGAPTVTKDGVSVAKDI
TLEDKFENMGAQMVKEVASKASDDAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI
DKAVAAAVAHVKSIAQPCTDSKAIAQVGTISANSDESIGGIIATAMEKVGKEGVITVEEG
TSLDNELDVVEGMQFDRGYLSPYFINNQDSMVAEHEHPFLLLVDKKISNIRELLPVLEAV
AKAGKPLIIVAEDVEGEALATLVVNNMRGIVKVAACKAPGFGDRRKAMLQDIAILTGATV
ISEEVGLDLESTTLEHLGTAKRVTLSKENTTIVDGAGNPDDIKARVQQIRVQIEETSSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGTALL
RAVAAIADLKGDNAEQTAGINLARRAMEAPLRQIVANAGDEASVVADKVKAGDGNFGYNA
ANGTYGDMLEMGILDPAKVTRTALQAAGSIAGLMITTEAMVADLPEDKSAPAMPDMGGMG
GMGGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaaaagacgttaaattcggtaacgaagcccgtcagaaaatgctcaagggtgtg
aacatcctggcagacgcggtaaaaaccactctgggcccgaaaggccgcaacgttgtactg
gacaagtctttcggtgcgcccaccgtcaccaaagacggtgtatccgtagcaaaagatatt
accctggaagacaagttcgaaaacatgggtgcgcagatggtgaaggaagtggcttcaaaa
gcctctgacgacgctggtgacggcaccaccaccgccaccgtactggcccaggctatcgta
aacgaaggtctgaaggccgttgctgccggcatgaaccccatggacctgaagcgcggaatc
gataaagccgttgccgccgctgtagcgcacgtgaagtccattgcccagccttgcaccgac
agcaaagccattgcccaggttggcaccatttctgccaactccgacgaatccatcggtggc
atcatcgccactgccatggaaaaagtgggtaaagaaggcgtgatcaccgttgaagaaggc
accagcctggacaacgaactggatgtggtagaaggcatgcagttcgaccgcggctacctg
tctccctacttcatcaacaaccaggacagcatggttgccgagcacgagcaccccttcctg
ctgttggttgacaagaaaatctccaacatccgcgaactgctgcccgtactggaagcggtt
gccaaagccggcaagccactgatcatcgtggccgaagacgtggaaggcgaagccctggcc
acgctggtagtgaacaacatgcgcggtatcgtgaaagtggccgcctgtaaggcaccgggt
ttcggtgaccgtcgcaaggccatgctgcaggacatcgccattctgaccggcgccactgtg
atttctgaagaagtgggcctggatctggaaagcacgactctggagcacctgggtaccgcc
aagcgcgtgaccttgtccaaggagaacaccaccatcgttgatggcgctggcaaccctgac
gacatcaaagcgcgtgttcagcagatccgcgtacagatcgaagaaacttcttccgattac
gaccgcgagaagctgcaagagcgcgtagccaagctggccggcggtgttgcggtaatcaag
gttggcgctgccaccgaagtggaaatgaaagagaagaaggcccgcgttgaagacgccctg
cacgcgacccgtgccgcggtggaagaaggcgtggtgcctggcggcggtactgcattgctg
cgcgctgtggcggctattgccgacctgaaaggcgacaatgccgagcagacggctggtatc
aacctggcccgtcgcgccatggaagcacctctgcgtcagatcgtggctaacgccggtgat
gaagcctctgtggttgccgacaaagtaaaagccggtgacggtaacttcggttacaacgcg
gccaatggtacctacggcgacatgcttgaaatgggcatcctggacccggccaaagtaacc
cgcactgcactgcaggctgctggttccattgccggtctgatgattaccaccgaagccatg
gtggctgacctgccagaagacaagtctgcacctgcaatgcctgacatgggcggcatgggt
ggcatgggcggcatgatgtaa
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