Simiduia agarivorans: M5M_18115
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Entry
M5M_18115 CDS
T02281
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
saga
Simiduia agarivorans
Pathway
saga03030
DNA replication
saga03430
Mismatch repair
saga03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
saga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M5M_18115
03430 Mismatch repair
M5M_18115
03440 Homologous recombination
M5M_18115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
saga03032
]
M5M_18115
03400 DNA repair and recombination proteins [BR:
saga03400
]
M5M_18115
Enzymes [BR:
saga01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
M5M_18115
DNA replication proteins [BR:
saga03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
M5M_18115
DNA repair and recombination proteins [BR:
saga03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
M5M_18115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
RuvB_N
AAA_16
AAA_22
AAA_5
AAA_2
AAA_30
AAA_19
AAA_18
AAA_14
nSTAND3
PIF1
Rad17
TsaE
AAA_7
AAA_28
SKI
Mg_chelatase
zf-CXXC
Herpes_Helicase
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AFV00752
UniProt:
K4KP15
LinkDB
All DBs
Position
3986985..3989036
Genome browser
AA seq
683 aa
AA seq
DB search
MSYQVLARKWRPRIFREMVGQEHVLQALINALDHNRLHHAYLFTGTRGVGKTTIARILAK
CLNCETGVSSEPCGQCSACNEIAEGRFVDLIEVDAASRTKVEDTRELLENVQYAPTRGRY
KVYLIDEVHMLSTSSFNALLKTLEEPPPHVKFLLATTDPQKLPVTVLSRCLQFNLKNMNP
ERIVGHLAYVLEKELVPFEEAALWQLGRAADGSMRDALSLTDQAIAFGNGKVAEAEVRSM
LGTLDQQLVYALLSALAAADTQALMSAVNQLAEHSPDYQGALAEMLSVLHRIAIAQAMPE
AIDNSFGDREQVLALAQAMPTEDVQLYYQTALLGRRDLPLAPDPRSGFDMVLLRMLAFKP
QGVVDLPKTALAQPASVQPASAPQAAPPVSAPQPAPETQSAAQPAAGAAGVETARAPAPA
TPPPAESLPPRDDTPPWDEAPPGLDGDEDDHQPSASAEKKTPEPVAAPQPSSPAQAEPVR
AESARAEPGLAEPSRANSQSLTPAPVAAQPAAPAPAPAPAPAPAPAPAPAPAPAPVQSKA
PAQPATHAPVRSYHLVTLKPGDWVGLYLELKVAGVLQSTAANSELVAVNGNQLSFVLDAA
NANLYDPSHQQRLADVLTAYFNEPVQVNIEPGEVKTETPSATAIRLRAEKQARALESLKT
DSLLQKLEATFQAALDESTVEPL
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggtactcgcccgcaaatggcggccgcgcatattccgcgagatggtgggg
caggagcatgtgctccaggcgttgattaacgccctggaccacaaccggctgcaccacgcc
tacctgttcaccggcacccgcggggtgggcaaaaccaccatcgcccgtattctggccaaa
tgccttaactgtgaaaccggcgtcagctcagagccgtgcggccagtgctcggcctgtaat
gaaattgccgaaggccgttttgtcgacctgatcgaagtggatgccgccagccgcactaag
gtggaagacacccgcgagctgctggaaaacgtccagtacgcgcccacccgtggccgctac
aaggtctacctcatcgacgaagtgcacatgctctccaccagcagcttcaatgccctgctg
aagaccctggaagagccgccaccccacgtgaaattcctgcttgccaccaccgatccgcaa
aagctgccggtgacggtgttgtcgcgctgcttgcagttcaacctcaagaacatgaacccc
gagcgcatcgtgggccatctggcgtacgtgctcgaaaaagagctggtgccgtttgaagag
gccgcgctctggcagttggggcgcgcggccgatggcagtatgcgcgatgcgctctcgctc
accgatcaggccatcgcctttggcaatggcaaggtggccgaggccgaggtgcggtctatg
ctcggcaccctggatcagcagctggtgtatgccctgttgtctgcgttggcggcagccgac
acccaggcgctgatgagcgccgtcaaccagctggccgaacactcgcccgactatcagggc
gcgttggcggaaatgctgtcggtgttacaccgcattgccatcgcccaggccatgcccgaa
gccatcgacaactcctttggcgatcgcgaacaggtgttggcgctggctcaggccatgccc
accgaagatgtccagctctattaccagaccgccttattgggccgccgcgatctgccgctg
gcacccgatccgcgcagcggttttgatatggtgttgttgcgcatgctggcgttcaaaccc
cagggtgtggtcgatttgcccaagaccgcgctggcgcagccggccagtgttcagccagcc
agtgcgccgcaggcagcgccgccagtcagcgcgccacaacccgcgcctgagacccaatct
gctgcccagccagccgctggcgccgccggagtggagacggcgagggcgcctgcaccggca
acgcccccgccggccgagagtctgccgccccgggatgacaccccgccctgggacgaagca
ccgcccgggctggacggcgatgaggatgatcatcagccaagcgcatccgcggaaaaaaaa
acacctgaaccggtagcagccccgcaaccgtcgtcgcccgctcaggctgaacctgtccgg
gccgaatctgcccgggccgaacctggtctggccgaaccgtctcgcgcaaacagccaatcc
ttgacgcccgcacctgtggccgcgcagcctgctgcacctgcacctgcacctgcacctgca
cctgcacctgcacctgcacctgcacctgcacctgcacctgcaccggtacaaagcaaagcg
cctgcacaaccggcgacacacgcgccggtcaggtcctaccacctggtcaccctcaaaccg
ggcgattgggtggggctgtatctggaattgaaagtggccggggtgctgcaaagcaccgct
gcgaacagtgaattggtggcggtaaatggcaaccagctgagttttgtcctggatgccgcc
aacgccaacctgtacgaccccagtcaccagcagcggctggccgatgtgctcacggcctat
ttcaacgagcccgtgcaggtgaatatcgagcccggtgaggtgaaaacggaaacgccgtcg
gccaccgctatccggctgcgcgcggagaaacaggcgcgcgccctggaaagtctgaaaacc
gattcgctgttgcagaaactggaagccacctttcaggccgcattggacgaatccacggta
gaacccctttaa
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