Simiduia agarivorans: M5M_18535
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Entry
M5M_18535 CDS
T02281
Symbol
fadB
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
saga
Simiduia agarivorans
Pathway
saga00071
Fatty acid degradation
saga00280
Valine, leucine and isoleucine degradation
saga00310
Lysine degradation
saga00362
Benzoate degradation
saga00380
Tryptophan metabolism
saga00410
beta-Alanine metabolism
saga00640
Propanoate metabolism
saga00650
Butanoate metabolism
saga00907
Pinene, camphor and geraniol degradation
saga00930
Caprolactam degradation
saga01100
Metabolic pathways
saga01110
Biosynthesis of secondary metabolites
saga01120
Microbial metabolism in diverse environments
saga01200
Carbon metabolism
saga01212
Fatty acid metabolism
Module
saga_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
saga00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
M5M_18535 (fadB)
00650 Butanoate metabolism
M5M_18535 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
M5M_18535 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
M5M_18535 (fadB)
00310 Lysine degradation
M5M_18535 (fadB)
00380 Tryptophan metabolism
M5M_18535 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
M5M_18535 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
M5M_18535 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
M5M_18535 (fadB)
00930 Caprolactam degradation
M5M_18535 (fadB)
Enzymes [BR:
saga01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
M5M_18535 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
M5M_18535 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
M5M_18535 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
M5M_18535 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
AFV00836
UniProt:
K4KRC4
LinkDB
All DBs
Position
4073737..4075884
Genome browser
AA seq
715 aa
AA seq
DB search
MIYSGKAITVRALDNGIAELCFDLADDSVNKFNQLTLAELKDATAAVAADKSIKGLLVTS
GKDCFIVGADITEFGANFSKSEEDIAAEVFETNKIFNAVEDLPIPTVTAINGVALGGGLE
MALATDYRVLAEGVKIGLPEVKLGIMPGFGGSVRLPRIIGADNAIEWIAGGSENRAEKAF
ADGAVDALVAPALLRDAAIDLLNRAISGELDYKAKRQEKLEKLKINDIESLMVFETAKGF
VAGKAGKHYPAPVTAVKSMQKNSTLGRDDALKVEAASIGKLAKTGAAASLVSLFLGDQML
MKKGKKQAAGAKKIEQGAVLGAGIMGGGIAYQSAYKGTPIMMKDIAQAGLDLGMGEAAKL
LSKLVERGRMTTDKMAKVLTAITPTLSYEGIDKADVVVEAVVENPKVKHAVLAEVEGKMR
ADAILSSNTSTISIDYLAQPLKRPENFCGMHFFNPVHKMPLVEVIRGAKTSDTAVAATVG
YALAMGKKPVVVRDCPGFLVNRILSPYMGCFMQMVNEGADFVQIDKVMEKFGWPMGPAYL
CDVVGIDTGVHAGETMSEGFPDRMKYDFKTASEVLYEAKRFGQKNGKGYYAYELDKKGRQ
KKVADESVWALLKDHVAPRKDVSDEEITERLMVSLCLEAVRCLEDGIVDSATELDMALIY
GIGFPPFLGGAIRYMESMGLANFVAIADKYAHLGGLYKVTDQLRAKAEAGQSYFA
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttattcaggcaaggcgatcactgtacgcgcgctggacaatggcatagcggagctg
tgttttgatctggctgacgactccgtcaataaattcaaccaactgacgctggccgagctg
aaagatgccacggcggctgtggcggctgacaaaagcatcaagggcctgctggttaccagt
ggcaaagattgctttatcgtgggggccgacatcactgaatttggcgccaacttctccaag
tccgaagaagacatcgccgccgaggtgtttgaaaccaacaagatctttaatgcggtggaa
gacctgcctattcccaccgtgactgccatcaacggcgtggcgctgggtggcggtctggaa
atggccctggccaccgactaccgcgtgctggccgaaggcgtgaaaatcggcctgccggaa
gtgaagctgggcatcatgccgggctttggtggttctgttcgtctgccgcgcatcatcggt
gcggataacgccatcgagtggattgccggcggtagcgagaaccgtgcggaaaaagccttt
gccgacggcgctgtcgatgcgctggttgcaccggcattgctgcgcgatgcagcgatcgat
ttgctgaatcgtgccatcagcggcgagctggattacaaagccaagcgccaggaaaaactg
gaaaagctcaagatcaacgacatcgaatccctgatggtgtttgaaaccgccaagggcttc
gtagccggtaaagcgggcaagcattaccctgcgccggtaaccgccgtaaaatccatgcag
aaaaactccaccctgggtcgcgacgacgcacttaaagtagaagctgccagcattggtaag
ctggcaaaaaccggcgctgctgcaagcctggtaagcctgttcctgggtgaccagatgctg
atgaaaaaaggcaagaagcaagccgccggcgcgaagaaaatcgagcaaggtgctgtgctg
ggtgccggtatcatgggtggcggtattgcttaccagtcggcctacaaaggcacgcccatc
atgatgaaagacatcgcccaggcgggtctggatctgggcatgggcgaagccgccaagctg
ttgtccaaactggttgagcgcggtcgcatgaccaccgacaaaatggctaaagtactgacc
gccattacgccgacgctcagttacgaaggcatcgacaaagccgatgtggtggtggaagcc
gtggtggaaaaccccaaggtcaaacacgccgtgttggcagaagtggaaggcaaaatgcgc
gcggatgccattctgtcatcaaacacctccaccatttctatcgattatctggcgcagcca
ctcaagcgcccggaaaatttctgcggcatgcacttctttaacccggtgcacaagatgcca
ttggtggaagtgatccgcggtgccaaaacctccgacaccgccgtggcggcgaccgtgggt
tacgcactggccatgggcaaaaagcccgttgtagtccgcgactgccccggctttttggtg
aaccgcatcctgtcgccctacatgggctgctttatgcagatggttaacgaaggcgccgac
ttcgtgcagatcgacaaggtcatggaaaaattcggctggcccatgggccccgcttacctg
tgtgacgtggtgggtatcgacaccggtgtacacgccggcgaaaccatgagcgaaggcttc
cccgatcgcatgaagtacgacttcaaaactgccagcgaagtgctgtacgaggccaagcgt
tttggtcagaagaacggcaaaggctattacgcttacgagctggacaaaaaaggtcgccag
aaaaaagtggccgacgagtctgtgtgggcgctgttgaaagatcatgtggcaccgcgcaag
gacgtgtctgatgaggaaatcaccgagcgcctgatggtctccctgtgtctggaagcggtt
cgctgcctggaagacggcattgtggattctgccaccgaactggatatggcactcatatac
ggcattggtttcccacccttcctgggcggcgccatccgttatatggagtccatgggcctg
gctaactttgtggccatcgccgacaaatacgcgcaccttggcggcttgtacaaggtgacc
gatcaactgcgcgccaaggcggaagccggccagagctacttcgcctaa
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