Simiduia agarivorans: M5M_19075
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Entry
M5M_19075 CDS
T02281
Symbol
aspS
Name
(GenBank) aspartyl-tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
saga
Simiduia agarivorans
Pathway
saga00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
saga00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
M5M_19075 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
saga01007
]
M5M_19075 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
saga03016
]
M5M_19075 (aspS)
03029 Mitochondrial biogenesis [BR:
saga03029
]
M5M_19075 (aspS)
Enzymes [BR:
saga01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
M5M_19075 (aspS)
Amino acid related enzymes [BR:
saga01007
]
Aminoacyl-tRNA synthetase
Class II (A)
M5M_19075 (aspS)
Transfer RNA biogenesis [BR:
saga03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
M5M_19075 (aspS)
Prokaryotic type
Other AARSs
M5M_19075 (aspS)
Mitochondrial biogenesis [BR:
saga03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
M5M_19075 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
AFV00944
UniProt:
K4KS04
LinkDB
All DBs
Position
4198890..4200662
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AA seq
590 aa
AA seq
DB search
MRTDYCGALNASFIDREVTLCGWVDRRRDHGGVIFLDLRDRDGIVQVVFDPDSANFALAD
KVRSEYVLKVKGRVRARSEATVNPKMATGEVEVYGLELEILNTAETPPFQLDSHVAVGED
VRLKYRYIDLRRQEMQHNLRFRSKVTTAIRNYLDGQGFLDIETPILTRATPEGARDYLVP
SRTHDGKFFALPQSPQLFKQLLMVSGFDRYYQVAKCFRDEDLRADRQPEFTQIDIETSFM
NEAQIMGIAEGMVKDLFKHLMDVDLGEFPHMTWQEAQDRYGSDKPDLRIPLELVEIKDLL
KDIEFKVFAGPANDPKCRVTALKVPGGAEISRKQIDDYTKFVGIYGAKGLAWIKVNEIEK
GVEGLQSPIIKFLGDDVTMKVMERLDAKNGDIVFFGADTIKVVSEALGALRCKLGADLNL
YTRKWAPLWVVDFPMFEETDEGVAALHHPFTAPSCSPEELEANPATALSRAYDMVLNGTE
LGGGSVRIHNQSMQQTVFKILGISAEEQREKFGFLLDALKFGAPPHGGLAFGLDRLIMLM
TDSSSIRDVIAFPKTQTAACVMTDAPGAVDNKQLRELHIRLREKETKEAK
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaccgactactgtggcgcccttaatgcttcttttattgaccgcgaagtgaccttg
tgcggctgggttgatcgtcgccgtgaccacggtggcgtgatattcctggatctgcgcgac
cgcgatggcattgtgcaggtggtgttcgacccggattcggccaattttgccctggccgac
aaggtgcgcagcgaatacgtgttgaaggttaaaggccgcgtgcgtgcgcgctctgaagcc
accgttaatccgaaaatggccaccggcgaggtggaggtgtacggcctggaactggaaatc
ctcaacaccgctgaaaccccacccttccagctggattcccacgtagcggtaggcgaggac
gtgcgcctcaagtaccgttatatcgatctgcgccggcaggaaatgcagcacaacttgcgc
ttccgctcgaaagtgaccaccgcgatccgcaattacctggatggccagggcttcctggat
atcgaaaccccgatcctgacccgtgccacgcccgaaggcgcgcgcgactatctggtgcct
tcgcgtacccacgacggcaagttcttcgcgctgccccagtcgccccagctgttcaagcag
ctgctgatggtgtccggctttgatcgctactaccaggtggccaagtgcttccgcgatgaa
gacctgcgcgccgaccgccagcccgaattcacccagatcgatatcgagacctcgttcatg
aacgaagctcagatcatgggcattgccgaaggcatggtgaaggacctgttcaagcacctg
atggacgtggacctgggcgagttcccgcacatgacctggcaggaagcacaggaccgttac
ggttccgataagcccgatctgcgcatcccgctggaactggtggaaatcaaagacctgctg
aaagacattgaattcaaagtcttcgccggcccggccaatgatcccaagtgccgcgtcacc
gcactgaaagtgcccggcggtgcggaaatttcccgcaagcagatcgacgactacaccaag
ttcgtgggcatttacggtgccaaaggtctggcctggatcaaggtcaacgaaatcgagaaa
ggcgtggaaggcctgcagtcgcccatcatcaaattcctgggcgacgacgtgaccatgaag
gtaatggagcgtctggacgccaaaaatggcgacatcgtgttcttcggcgccgacaccatc
aaagtggtatcggaagcgttgggcgcactgcgttgcaagctgggtgccgacctcaatctc
tacacccgtaagtgggcacctctgtgggtggtggatttccccatgttcgaggaaaccgac
gaaggcgtggcggcattgcaccatccctttaccgcgccttcctgcagcccggaagaactg
gaagccaacccggccacagcgctgtcgcgcgcttatgacatggtgctgaacggtaccgag
ctgggcggtgggtctgtgcgtatccacaaccagtccatgcagcagaccgtgttcaaaatt
ctgggcatctccgcggaagaacagcgcgagaagttcggcttcctgttggatgcgctcaag
ttcggtgcgccgccccacggtggactggcctttggcctggaccgtctgatcatgctgatg
accgactccagctccatccgcgacgtgattgcgttcccgaaaacccagaccgcggcctgt
gtaatgacagacgccccgggtgcggtggataacaagcagctgcgcgagctgcacatccgc
ctgcgcgagaaagagaccaaagaagcgaagtaa
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